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11-0909-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22337471 [Map]; Strand: c
      • AT3G60420.2 - [+] show detail - Phosphoglycerate mutase family protein
        Distance: 0; Region: exon7 (3UTR)
      • AT3G60420.3 - [+] show detail - Phosphoglycerate mutase family protein
        Distance: 0; Region: exon4 (3UTR)
      • AT3G60440.1 - [+] show detail - Phosphoglycerate mutase family protein
        Distance: -322; Region: promoter
    Flanking Genome Sequence: 11-0909-1 - 5-prime edge 
    NCCANACCGN AATCAAAAAT TTGAAACAAT TGAGAATAGA TAAATAATGG 
    TGATGATAAT ATCTTTTATT TGAATTTAAA ATTACTAAGT GAAGGCAAAT 
    TCTGAACCAA AATAAAAAAA AATCAGAGAT TTCAATATAG ACTGAATCAG 
    TCAAGCGACG GCTAACGCCG GTTTTATCCG GTTCGTAGGG ATCATACGAA 
    GACAATGACA AAATTAACCG GAGTTGGAGG GAGGGNACAT GATACCATCT 
    TGACCATGAC TTGTAACGAC TTCAAAATCT CCAACTTCAC TAGAGGAGAN 
    CNGTCTTTGT TGTTNANCAC AAGCNCAAAA ATCTAACCTG TGCGTGGCCT 
    CTTTNTNGAA TGTGGNATAT GNAAAGNTAN NAGNCNGGGC CGNNGACCAC 
    NCGTGCCCNN TNG

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22337586 [Map]; Strand: c
      • AT3G60420.3 - [+] show detail - Phosphoglycerate mutase family protein
        Distance: 0; Region: exon4 (3UTR)
      • AT3G60440.1 - [+] show detail - Phosphoglycerate mutase family protein
        Distance: -207; Region: promoter
    Flanking Genome Sequence: 11-0909-1 - 3-prime edge 
    GGTTNGGTTG TGTANGTCGA TNNACCTTTG ATTTTCGTAA NTNTATTTAC 
    ATCANCATAC TTNTAAATAC ATAAACTGGT TAGCTAAGTC TCAATCAAGT 
    TAAGCAATGT GGTTATTAGT CATGGAGTAG TCTGTTCAAA TTCAAGGACC 
    ACANAAATCC CCAATCCATG ATCTTGTAGT TTCCGGTTTA GCCGGTTTTG 
    TCCATTACNA TGATGTTAAA AAAAAGTTGT TTNTATAAAA CATAGAAAGA 
    GAAGAAACAG AAATTAAAAA ATAAAATTAA AAAAGCGCCA TGTATACAAC 
    AATCACTTCC AACGTAGTCT CAAAGGTCAC AGCAGCAGCA GCAACAATCA 
    GAGCAACAAT GGAGTCTGCT AAGTCAAAAA ATCCCGATAG CTACCAAAAT 
    ATCTTGATGA TGCGTNACGG TGATCGCATT GACAAAATCG ATCCACTCTG 
    GCTTGATACA GCTGCGANAC CTTGGGATN

AT3G60420.2

Model type
Protein coding
Short Description
Phosphoglycerate mutase family protein
Computational Description
Phosphoglycerate mutase family protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT3G60450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G60420.3

Model type
Protein coding
Short Description
Phosphoglycerate mutase family protein
Computational Description
Phosphoglycerate mutase family protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), PRIB5 (InterPro:IPR012398); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT3G60440.1).
Link
InterPro Scan - TAIR

AT3G60440.1

Model type
Protein coding
Short Description
Phosphoglycerate mutase family protein
Computational Description
Phosphoglycerate mutase family protein; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), PRIB5 (InterPro:IPR012398); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT3G60450.1); Has 266 Blast hits to 262 proteins in 108 species: Archae - 0; Bacteria - 57; Metazoa - 8; Fungi - 71; Plants - 68; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink).
Link
InterPro Scan - TAIR