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11-0912-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1336857 [Map]; Strand: c
      • AT1G04770.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 11-0912-1 - 5-prime edge 
    GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCGGT AGGGAAGCAC GATGAGGCGA GGTCGATTCT 
    CTTTCGTGAT GTACTAATGG AGAACAAAGA AGGGTCTGGT GATCCGAGGT 
    TGATGGCTCG GGTTCAAGAG CTATTGAGTG AGCTAAAGCC ACAGGAAGAA 
    GAAGCAGCNG GCTTCTGTGT CTGTGGAATG TGAAGTTGGT ATAGATGAGA 
    TAGCNGGTTG TCGAAGGACT TGATGAGTTT GTGAAGGAAT GGAGGAGGCC 
    TTATAGGACA AGAAGACTTC CGATTTTCGA AGAGATCTTA CCACTGAGAG 
    ATCAATTGGC TTGTTGATGA TTCTCTGTGT GTTTGGATTG ATGTTTGAAT 
    ACTGAATAGG AACCTTTTTG GGTAGAAGAA TGTAGTGAGT GAATAGAGTT 
    TACCTCTTGT AAGCT

AT1G04770.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G48850.1); Has 226 Blast hits to 224 proteins in 29 species: Archae - 0; Bacteria - 22; Metazoa - 1; Fungi - 0; Plants - 173; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).
Link
InterPro Scan - TAIR