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11-0915-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1536592 [Map]; Strand: w
      • AT1G05280.1 - [+] show detail - Protein of unknown function (DUF604)
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-0915-1 - 5-prime edge 
    TGTAATACCA TGATGTGTGG TCGTATTTGG AGAGAGTTCG AGCGAGGTTT 
    TCAGGAATGA AAATCGTGTC GTCGTCTCCA AATACGTACC ATCTTACTTC 
    TTCTGAGGAG GTGTTGAATA GCCTGACAGT TTCTAGAACG CACCGCGCGA 
    TTCGGATCGC GTTTCTGTCA CCGCCTCTCC AAGTGTACCT GTAGACGCTT 
    GTCTCATTAG GCCGATTCGA TTTAACTGTA CCCTAATTTG CAAGTTAAAT 
    TGATTAAGGA ATAAAGTAGG AATATCAACT AATTAATTTC TGTCTTTAAA 
    TTGTTTTCAT ATATAAAATT ACAAAAAAAT GTCACAATTC AATATTTTAA 
    ATTTATATAT CCTATACTTT AAATCTTTAA TAGACGTTAA ACTAATAAAT 
    CGCAAACTAT ACTTATTTTT AATTTATGAT GAAACAGAAG TTGAAACTTT 
    TTTCTGACTA AAAAACAATA AACAAATTGA ACTAAATTAC CTGAACCGGG 
    AAGTATCTTG GGAAACACAA ACCGGAGGAA GGAGATATGA ATCTGTGTGG 
    TTTTGANAAA ACGGCAAGGG ACGCTCAACA AANACNCANC CTCTCATTTT 
    NTGAGCATNC CACCNAANNT ANNANNNNNG GCCNNNNACC ANNCNTNNNC 
    NT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1536476 [Map]; Strand: w
      • AT1G05280.1 - [+] show detail - Protein of unknown function (DUF604)
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-0915-1 - 3-prime edge 
    GTATTACATA GGATCAACCT CGGAGATTTA TCACCAGAAC TCTATGTTCG 
    GACACGACAT GGCGTTCGGG GGTGGTGGGT ACGCTTTAAG CAGCTCATTG 
    GCTAATGTTT TAGCTAGAAA TTTCGATTCT TGTATCGAAC GATATCCACA 
    TTTGTACNGG AGGAGACTCT AGGGTTTATG CTTGTGTGCT TGAGCTTGGG 
    GTTGGATTGT CTAAAGAGCC TGGCTTCCAT CAGGTTTTAA AGTCTATATG 
    TACGTAATTA ATAGTTATTA GTAAAAAAAA AAACTGATTA AAAATNTTTG 
    TTTTTNTTTT TNAANCANTT TGATGTGAAA GGAAATGCNT TGGGAATNTT 
    GACNTCNCNT TCAACNAAAC CGTNGGNGTC NCTACNCCNC ATGGCTCANA 
    TTGNCCCAAT NTTTCCAAAC TNAACCANTT TTTCCGNGGN CCNCCNCCTT 
    TTTTCCNCCG NAAAACTCNA CCCTNTCCGT NTTTTTNAAC TNTCCGTTNG 
    CTACAACCGT NGGTNCTNTN GGACCATNTC CGTNTTTTGG GGATNTNCTG 
    TNCAGGTNAA NACTTTTTTN CCCTTTTTTG TTCAGGACNC CAATANCGTA 
    ATGTTNTTAA TTCAAAATTN AAATGTTTGT TCAATTGTNA AATNGANGGC 
    NGGCNTTTGT TTNTACGGGA TGTTTTGNGG GCNCAAAAAA CNTNCCNACC 
    NTGGNAAAAN TNAGGNGGNT TANNTNNNGN TTNCNCNTTN NNNNAAAAAA 
    NATTNTNNNG ANCCTTNC

AT1G05280.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF604)
Computational Description
Protein of unknown function (DUF604); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT4G15240.1); Has 523 Blast hits to 513 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 61; Fungi - 172; Plants - 273; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
Link
InterPro Scan - TAIR