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Mutant Lines
11-0926-1

11-0926-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 10463093 [Map]; Strand: w
- AT1G29880.1 - [+] show detail - glycyl-tRNA synthetase / glycine--tRNA ligase
  Distance: -292; Region: promoter
- AT1G29890.2 - [+] show detail - O-acetyltransferase family protein
  Distance: -310; Region: promoter
- AT1G29890.1 - [+] show detail - O-acetyltransferase family protein
  Distance: -330; Region: promoter

CCCTCACCTA CCAGAAAGGT CCACTACGTT TGTTTATCTA TAGGCAAATC 
CACACTAATG TTTTTGTGTT CTTTTTTTCC TCTTTAGATA CATAAATATG 
TTGTCAAAAC CAAACCGAAA TGCATGCATT TCTGTAAGCA AAGGCATTGC 
GATTAGAAAG AAAAGTTTGT GTGCAGTGAG AGCTGTAAAT TGCGTATAAC 
CACAATCAGA TTACCTCTGT AATTTACTTA ATTAGTAATA AATAAGTAAT 
TAATAATTTA ACAATTAGAG GAGAGGCAAT CGCCAAACCA ACCAACCGTA 
CGATTGAATT TGAAGAAAAC GACGTCGCGT CCGCCATTTT CTTCTTCCTT 
GAAGCAATAG CTTCTTCACT TCANATCTCT TCTTCTTCTT CTTCGTTGCC 
ACTGCCCCAA TTAACTCTGT CTATCTCTCT CTTCATCCGC TAGATTGAAA 
CTAATTGCAA TTGGAGTGTA TATTGCAGTA TCTAGTTTTT GAATGTCTGG 
GTATTCCTTT ATGGATC

3 prime edge [+] show sequence

Chromosome: 1; Position: 10462977 [Map]; Strand: w
- AT1G29880.1 - [+] show detail - glycyl-tRNA synthetase / glycine--tRNA ligase
  Distance: -176; Region: promoter
- AT1G29890.2 - [+] show detail - O-acetyltransferase family protein
  Distance: -426; Region: promoter
- AT1G29890.1 - [+] show detail - O-acetyltransferase family protein
  Distance: -446; Region: promoter

GGTGAGGGAT AAGTTGGTAC CAAACATCAA TGTTCACATA TTTGTTTGGT 
GTTAAAGCAT TTGGAAAATT TTGCATCCAT GTTGAAACGT CAAACGTGTA 
GATGTGATGA CATTTAAATG TCTTTACGTC TTTATTGGGT TTAGATTTCA 
TTTCGTCAAC CAAACCCACT CCTTGGGCCC AAAGGTTTCC ACATTATCAT 
CTTAAACCCT AAGGGGGCCA CTAGTAAGTG GAAACAAACA CTTCGTCGAA 
TGCGCATCTT CTCTACGTTC GTCTTTCATC GCAGACAACA AATCTTCAAT 
CTTCGTCAAT TCCAAACCAC CACAATCCTT CGCAACCCAA TCTCCNTGNC 
TNNAAACCNA ATTCCNNNGG ACGNCACCGA GCAANACTNT ACNAATATCT 
GNTTCCAANN ANTCCTGNTA CGAAANNACT CANGGNTNCN CCGNCCNAGN 
TCNCAGGGNT TCCCGGGCTN CTAAACCAGA TATCNANGCT NNCANNGANN 
AACTCAACAA ATTGAAGCTC GANAAATCTA CCGTTCNANA AGGAGCTTNA 
GCNCTNTTAT AANGTGGNNT CCGGCAATGG GTTCNCTTTA ACCGGNGANG 
NCTTCTCCGA AAAGCNTNTT TNCNNTACNN CTCNAGCCGG CCGTTTNNTC 
ATTGTNNTCC CCNTCCGTNA AAAANTTTCC ANTGGCGGGT CGCGTGGNCC 
TTTTNGANTA TGGNCCCNCN TTGNGNGGGG CNNNNNGAAC CCNTGNAAGA

AT1G29880.1

Model type: Protein coding
Short Description: glycyl-tRNA synthetase / glycine--tRNA ligase
Computational Description: glycyl-tRNA synthetase / glycine--tRNA ligase; FUNCTIONS IN: glycine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: response to cadmium ion, glycyl-tRNA aminoacylation; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Glycyl-tRNA synthetase, alpha2 dimer (InterPro:IPR002315), S15/NS1, RNA-binding (InterPro:IPR009068), Glycyl-tRNA synthetase, alpha2 dimer, C-terminal (InterPro:IPR018160), Anticodon-binding (InterPro:IPR004154), WHEP-TRS (InterPro:IPR000738), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: tRNA synthetase class II (G, H, P and S) family protein (TAIR:AT1G29870.1); Has 6392 Blast hits to 4464 proteins in 1181 species: Archae - 269; Bacteria - 3324; Metazoa - 242; Fungi - 171; Plants - 75; Viruses - 0; Other Eukaryotes - 2311 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G29890.1

Model type: Protein coding
Short Description: O-acetyltransferase family protein
Computational Description: O-acetyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cas1p-like (InterPro:IPR012419); BEST Arabidopsis thaliana protein match is: O-acetyltransferase family protein (TAIR:AT2G34410.2); Has 271 Blast hits to 269 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 41; Plants - 106; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G29890.2

Model type: Protein coding
Short Description: O-acetyltransferase family protein
Computational Description: O-acetyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Cas1p-like (InterPro:IPR012419); BEST Arabidopsis thaliana protein match is: O-acetyltransferase family protein (TAIR:AT2G34410.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR