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11-0930-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17152333 [Map]; Strand: w
      • AT4G36250.1 - [+] show detail - aldehyde dehydrogenase 3F1
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: 11-0930-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCTA 
    GAGCTTCAAC ATATCAATCT ACATAAAACC ACCACACTTT TAGAAATCCT
    ACAGAAACAG AGTTTGCGAT TGCGTTTGCA TTGTGTGCAT TCACCTACCA
    GAGTAGGCGC GAAACTCTTT TCGATAAGAA CGTAATCTAC AGAGATACAA
    GCT
  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17152397 [Map]; Strand: w
      • AT4G36250.1 - [+] show detail - aldehyde dehydrogenase 3F1
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: 11-0930-1 - 5-prime edge
    GTTGAAGCCT ACGATAAAGT CTTTCTTTGG CGAAAATCCT AAAGAATCTG 
    GATGTCTCTC AAGGATTGCA AACAAGCACC ACGTTCAGAG ACTGTCTCGT
    CTTCTTAGCG ATCCTCGTGT CCAAGCT

AT4G36250.1

Model type
Protein coding
Short Description
aldehyde dehydrogenase 3F1
Curator Summary
Encodes a putative aldehyde dehydrogenase. The gene is not responsive to osmotic stress and is expressed constitutively at a low level in plantlets and root cultures.
Computational Description
aldehyde dehydrogenase 3F1 (ALDH3F1); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity; INVOLVED IN: cellular aldehyde metabolic process, oxidation reduction, metabolic process; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase NAD(P)-dependent (InterPro:IPR012394); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 3H1 (TAIR:AT1G44170.2); Has 51213 Blast hits to 51182 proteins in 2839 species: Archae - 470; Bacteria - 31264; Metazoa - 2305; Fungi - 2096; Plants - 995; Viruses - 0; Other Eukaryotes - 14083 (source: NCBI BLink).
Link
InterPro Scan - TAIR