1. Home
  2. Mutant Lines
  3. 11-0933-1

11-0933-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16787896 [Map]; Strand: c
      • AT4G35280.1 - [+] show detail - C2H2-like zinc finger protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-0933-1 - 5-prime edge 
    GCATTAATCC TCCTCCTAAC TACCGTGTGC CCACCGCGGC TTCTTCAAAA 
    CAGTTAAACC AGATATTACC AAATTGGGTC TCATTTATGT CCGAGGAAGA 
    CCATGAAGTC GCTTCTTGTC TCTTAATGCN TGTCTAATGG TACACCATCA 
    TCATCGAGTA GTGAACGGTT CGAGTGTGGA GGATGTAAGA AAGTGTTTGG 
    ATCACATCAG GCTTTAGGAG GACACAGAGC GAGTCATAAA AACGTTAAAG 
    GCTGTTTCGC TATCACAAAC GTAACCGATG ATCCTATGAC GGTTTCTACT 
    TCTAGTGGGC ATGATCATCA GGGAAAAATC CTTACGTTTT CAGGGCATCA 
    TAAGTGTAAT ATCTGTTTTA GAGTGTTCTC GAGTGGTCAA GCT

AT4G35280.1

Model type
Protein coding
Short Description
C2H2-like zinc finger protein
Computational Description
C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G17180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR