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Mutant Lines
11-0936-1

11-0936-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 586964 [Map]; Strand: w
- AT1G02690.1 - [+] show detail - importin alpha isoform 6
  Distance: 0; Region: exon10 (CDS)
- AT1G02690.2 - [+] show detail - importin alpha isoform 6
  Distance: 0; Region: exon10 (CDS)

CCTGGAGCAT GTATTGGGCG TGCAAATGAC NAGGAGGANA GATNTNAGGC 
CGGTGTGGAT GCTCCTGANA AGNGNTCANA TCTTCCGGTT TCCAATTCGG 
AAACCAAAGT GGTAATGCTC CTACGGGTGG ATTCAACTTT TGGTTGAAGG 
TTTCTGTANT ATTCTCTCAG TTGCTTGAAC TTAAGAACAA AGGTCGCTCG 
TTGTCTTTTC TAAAAACAGT TTAGGTTTTT TTTTCTCTTT TTTGGGTNAT 
GTTTNGAGNG AATTTTGTAT TTTTAAAANT TNGGATATTT TGTTCTCTCN 
CGTTTAAGGN GGAAATNAAA GGGTTNNACT ATCTGCTCTG CTATGNGCTT 
TTTAAGCTNT CCTGCTNAAA ANAANNATNA AATAAATGCG ANAAAAANGA 
CTTNTTAAAG NTNNNANCCC GGGCCGGGGA CAAAACNNNC CCNNT

3 prime edge [+] show sequence

Chromosome: 1; Position: 586853 [Map]; Strand: w
- AT1G02690.1 - [+] show detail - importin alpha isoform 6
  Distance: 0; Region: exon10 (CDS)
- AT1G02690.2 - [+] show detail - importin alpha isoform 6
  Distance: 0; Region: exon10 (CDS)

ACTCCAGGAT TTTGACTGCT TTCTCATAAA TCTCATTATT ATCGTGACTC 
TGAAGATTCT CAATCTTGNC CAAACCATCT GCGTCTTCAA TCATCTGCGC 
GTACAGATTA TCAGTTTCCT GTGTTGCCTA GATTCTTCTC GGCTTCACCT 
ACTTTGAGAA TGTTTTCTAG ACCTTCCAAA GTCACCTGTG ACAACCCTTG 
GATCGGGACA CGGTAGGAGA TCACACAGGG GTCTGATGCA GCCTTGGCTC 
ACGAGAAACC TGCAAGGATA TAAGAGGTTC TATAACAAGA ATCACTGAAA 
AAAAAACTAA AAAGAGACAG AAACAATGAG ATTTGTTGTA CTTGATTTGG 
TCATGATTGC CACCANAAGT TGCATTANAN ATTGCCCAAA CAGCTTCTTT 
CTTAATTTCN AATT

AT1G02690.1

Model type: Protein coding
Short Description: importin alpha isoform 6
Curator Summary: Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.
Computational Description: importin alpha isoform 6 (IMPA-6); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Importin-alpha-like, importin-beta-binding domain (InterPro:IPR002652), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G02150.1); Has 4537 Blast hits to 3341 proteins in 295 species: Archae - 4; Bacteria - 37; Metazoa - 1783; Fungi - 593; Plants - 1355; Viruses - 0; Other Eukaryotes - 765 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G02690.2

Model type: Protein coding
Short Description: importin alpha isoform 6
Curator Summary: Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.
Computational Description: importin alpha isoform 6 (IMPA-6); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Importin-alpha-like, importin-beta-binding domain (InterPro:IPR002652), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G02150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR