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11-0944-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 2907885 [Map]; Strand: w
      • AT5G09360.1 - [+] show detail - laccase 14
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 11-0944-1 - 3-prime edge 
    TGAAAACGGT AGAGGTATTT TACCGACCGT TACCGAAACG TTACGTTGAC 
    AATTGATAGG CGAATGGTGG AAGAAGGAAA ACATAATGCA TATACCAGGA 
    AAAGCTAATA AAACCGGAGG AGAACCGGCC ATCTCTGACT CATATACCAT 
    AAACGGACAA CCCGGTTATC TATACCCCTG CTCTAAACCG GGTAAGTTTC 
    AACACTACAA GCTCAAATCT TACAATCAAA AATTCATATT TTTCTTTATA 
    ATTCCACAAC AGAAACATTC AAAATAACGG TGGTGCGTGG CCGTCGATAC 
    CTTCTACGGA TTATCAACGC CGTGATGGAC GAAGAACTCT TCTTTGCAAT 
    CGCAAACCAC ACCTTAACCG TTGTAGCCAA AGACGGTTTC TACTTAAAAC 
    ATTTCAAATC TGATTATCTA ATGATCACTC CGGGACAATC TATGGACGTC 
    CTCCTCCATG CGAACCAACG GCCTAACCAC TACTTTGTGG CGGCCAGAGC 
    TTACTCCTCC GCATTTGGTG CCGGTTTTGA CAAAACCACC ACCACAGCCA 
    TATTACAATA CAAAGGTGAT ACCTTAAACC GGAATAAACC GATTCTACCC 
    TATCTGCCTC CTTACAATCG TACCGAGGCA TCTACCCGGT TCACTAACCA 
    ATTCAGAAGT CAGCGTCCGG TTAACGTCCC GGTTAAAATC AACACTCGTC 
    TTCTCTACGC GATCTCCGTG AACTTGATGA ATTGCTCCGA CGATAGACCT 
    TGTACCGGTC CGTTCGGGAA NAGATTCTCT T

AT5G09360.1

Model type
Protein coding
Short Description
laccase 14
Curator Summary
putative laccase, a member of laccase family of genes (17 members in Arabidopsis).
Computational Description
laccase 14 (LAC14); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: central cell, fruit; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 12 (TAIR:AT5G05390.1); Has 9817 Blast hits to 8551 proteins in 1490 species: Archae - 32; Bacteria - 4030; Metazoa - 479; Fungi - 3363; Plants - 1557; Viruses - 0; Other Eukaryotes - 356 (source: NCBI BLink).
Link
InterPro Scan - TAIR