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11-0948-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 18025126 [Map]; Strand: w
      • AT4G38545.2 - [+] show detail - other RNA
        Distance: 0; Region: intron1 (NonCoding)
      • AT4G38545.1 - [+] show detail - other RNA
        Distance: 0; Region: intron1 (NonCoding)
      • AT4G38550.1 - [+] show detail - Arabidopsis phospholipase-like protein (PEARLI 4) family
        Distance: -509; Region: promoter
    Flanking Genome Sequence: 11-0948-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TGTCGGNACN AGGCNGGCCT ACANTANCAA NGNGGGCCNA TAACNNCGCG 
    CTNCTGGTAT CAATTGAAGT AGTCATTTTC TTTTCTCATT CATCACTTGT 
    TGATATCAGA GCTTTAGATT GCCGTAAAAA ATAAAAGAGC TTCTTGTTCA 
    CTACACAAAC TTTACTTTAT TAATTCTGAG TTTGTTATAT GAAATAACAC 
    TAAACAGATA GATAGTCTTT GAAGCAAACC AAAGGTGAAA ACTGTTCTGC 
    AGTTGGTGAT GACAAGAAGA ATCACAAGCT

AT4G38545.1

Model type
Other RNA
Short Description
other RNA
Curator Summary
Potential natural antisense gene, locus overlaps with AT4G38530 and AT4G38540
Link
InterPro Scan - TAIR

AT4G38545.2

Model type
Other RNA
Short Description
other RNA
Curator Summary
Potential natural antisense gene, locus overlaps with AT4G38530 and AT4G38540
Link
InterPro Scan - TAIR

AT4G38550.1

Model type
Protein coding
Short Description
Arabidopsis phospholipase-like protein (PEARLI 4) family
Computational Description
Arabidopsis phospholipase-like protein (PEARLI 4) family; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase-like, arabidopsis (InterPro:IPR007942); BEST Arabidopsis thaliana protein match is: Arabidopsis phospholipase-like protein (PEARLI 4) family (TAIR:AT2G20950.1); Has 2973 Blast hits to 2400 proteins in 345 species: Archae - 8; Bacteria - 147; Metazoa - 1113; Fungi - 821; Plants - 590; Viruses - 45; Other Eukaryotes - 249 (source: NCBI BLink).
Link
InterPro Scan - TAIR