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Mutant Lines
11-0952-1

11-0952-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 1241076 [Map]; Strand: w
- AT1G04550.1 - [+] show detail - AUX/IAA transcriptional regulator family protein
  Distance: 0; Region: exon2 (CDS)
- AT1G04550.2 - [+] show detail - AUX/IAA transcriptional regulator family protein
  Distance: 0; Region: exon2 (CDS)

ATAAACTAAC AAAATCGGTT ATACGATAAC GGTCGGTACG GGATTTTCCC 
ATCCTACTTT CATCATGGCC ACCAATTGGG TTACACAGGA TGAACAGTTT 
GGTTAATAAC CAAGCTATGA AGGCAGCAAG AGCGGAAGAA GGAGACGGGG 
AGAAGAAAGT TGTGAAGAAT GATGAGCTCA AAGATGTGTC AATGAAGGTG 
AATGCGAAAG TTCAGGGCTT AGGGTTTGTT AAGGTGAATA TGGATGGAGT 
TGGTATAGGC AGAAAAGTGG ATATGAGAGC TCATTCGTCT TACGAAAACT 
TGGCTCAGAC GCTTGAGGAA ATGTTCTTTG GAATGACAGG TCTGTACTGT 
TTTCAAATGC GTACACTATA AACCCGATGT TTTCTATGAA TCTACTGATA 
GTTTCTGTTT TATCTATCAG GTACTACTTG TCGAGAAAAG GTTAAACCTT 
TAAGGCTTTT AGATGGATCA TCAGACTTTG TACTCACTTA TGAAGATAAG 
GAAGGGGATT GGATGCTTGT TGGAGATGTT CCATGGAGGT AAGATTCGGA 
TATTAAGCAG TATTGCAGTA GTTCAAAACC TGATTAGTCT CTTTTCTCTC 
TTTTTGTTTA GAATGTTTAT CAACTCGGTG AAAAGGCTTC GGATCATGGG 
AACCTCANAA GCTAGTGGAC TAGGTAAGTT TTAAAGATCA TCTTCTGGTT 
TCTTGATTTC TCGTCTTGAC TAATGAAAAA GACTGATTGA ATCATTTTTA 
ATGCAGCTCC AAGACGTCNA GAGCAGAAGG ATAGACNAAG AAACAACCCT 
GTTTAGCTTN CCTTCCAA

3 prime edge [+] show sequence

Chromosome: 1; Position: 1241058 [Map]; Strand: w
- AT1G04550.1 - [+] show detail - AUX/IAA transcriptional regulator family protein
  Distance: 0; Region: exon2 (CDS)
- AT1G04550.2 - [+] show detail - AUX/IAA transcriptional regulator family protein
  Distance: 0; Region: exon2 (CDS)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
TTGACTGCCA CAACAAACCA AGAAATTTCC ACTCAATGGC TCTCGAAATT 
CAGATGTAAT CATCTAAACA GACATTAAAA TGAACAAATC TTAGCATTTG 
CATGACTCCA TAGAGAAATC TATAGCACAG GACAAGCACA AGCTCATCAA 
TGGAGATAGA TACCTAACTC TTATTCAGGG TAAACTAAAA CAAAAGCACC 
TACACAATTC TGTCCTGAGA TGGCATAACA CTCACATCAC AAGATTTGAG 
CTTTCTTAAT AAGAAAAAGG ACGAACCTTG AACGAGGAGG AGAAGCTCCT 
TGGTGAGAGG AAGATTCAGC AGAGCGTTTA GACCCAACGG AAGGAAAATC 
CTTAGCAGTA AGAATCCTCC CACGCTCTTT CCACGCGCCA CCACCGAGGC 
TGAGCCCTAA TCCCAATTCC AGCTCACTCT CCGCCGGAAG ATTACTCTTC 
CCCACCTCCA ATTCTGACAC ACCACGCATG TCAATAACAA AACCCTAGAC 
TCCAATGATA CCAGCAGAGA AAGTGTCTTT CAAATAACCC ACACAAAAAA 
GAAGCT

AT1G04550.1

Model type: Protein coding
Short Description: AUX/IAA transcriptional regulator family protein
Curator Summary: IAA12/BDL plays a role in auxin-mediated processes of apical-basal patterning in the embryo. bdl mutants lack a primary root meristem
Computational Description: indole-3-acetic acid inducible 12 (IAA12); FUNCTIONS IN: transcription repressor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, embryonic pattern specification, root development; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: auxin-induced protein 13 (TAIR:AT2G33310.3); Has 1087 Blast hits to 1087 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1087; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G04550.2

Model type: Protein coding
Short Description: AUX/IAA transcriptional regulator family protein
Curator Summary: IAA12/BDL plays a role in auxin-mediated processes of apical-basal patterning in the embryo. bdl mutants lack a primary root meristem
Computational Description: indole-3-acetic acid inducible 12 (IAA12); FUNCTIONS IN: transcription repressor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, embryonic pattern specification, root development; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: auxin-induced protein 13 (TAIR:AT2G33310.3); Has 2001 Blast hits to 2000 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2000; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link: InterPro Scan - TAIR