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Mutant Lines
11-0955-1

11-0955-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 4; Position: 2408447 [Map]; Strand: w
  - AT4G04740.1 - [+] show detail - calcium-dependent protein kinase 23
    Distance: 0; Region: exon1 (CDS)
  - AT4G04740.2 - [+] show detail - calcium-dependent protein kinase 23
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 11-0955-1 - 5-prime edge
```
GTGTCGATGG AGTTGGGACT TGATCAACGA TATGGGTTTG GAGTGGATTG 
ATCGGAATTG TTCTTTCGCC GCCGTCGTTT TGAGTTTTCC GGTGTTTACT 
GCTGAAGCAA CCCATTAGTA AAGGAGGAGA CTTTTCGTTC TTCTTGGATT 
GAAGAAGTAG AAGAAGATAA GCT
```

3 prime edge [+] show sequence

Chromosome: 4; Position: 2408334 [Map]; Strand: w
- AT4G04740.1 - [+] show detail - calcium-dependent protein kinase 23
  Distance: 0; Region: exon1 (CDS)
- AT4G04740.2 - [+] show detail - calcium-dependent protein kinase 23
  Distance: 0; Region: exon1 (CDS)

ATCGACACCC ATCTCAGTTC GATATCCAGA GACAATTTTA GGTAAGGGGA 
AAGCATTAGG GATTTTAGGT AAACCCTTCG AAGACATCAG GAAATTTTAC 
AGCTTGGGGA AAGAATTAGG TCGAGGTGGT TTAGGGATTA CGTATATGTG 
TAAAGAGATT TCGACTGGGA ACAATTACGC TTGCAAATCG ATTCTCAAGA 
GGAAGCTAAT TAGTGAGCAG GGTAGAGAAG ATGTGAAGAC AGAGATTCAG 
ATAATGCAGC ATTTGTTTGG ACAACCAAAC GTTGTTGAGA TCAAAGGTGC 
TTATGAGGAT AGACAATATA TACATTTGGT TATGGAGTTG TGTGCTGGTG 
GTGAGTTGTT TGATAGGATT ATAGCTCGGG GTCATTACTC TGAGAGAGCT 
GCTGCTGGTA TCATTAGGTC TATTGTGAGT GTTGTTCAGA TTTGTCATTT 
GAAGGGTGTG ATTCATCGAG ATCTCAAGCC TGAGAATTTC TTGTTCTCGA 
GTAAGGAGGA GAATGCAATG CTTAAAGTAA CCGATTTCGG GTTGTCCGCG 
TTCATCGAAG AAGGTTAGCT ATANAATCTA TAGATTGTCT TGCANAANTC 
TCTTTANTAT CTAAATTCAT CTTACNAGTT CATTGAATCN TGATGTCNTA 
TACTCTANAA CAANAATANA ATGTTNTGCN TNNNGGAATC CNATTTNAAA 
TGTTCTGNGT TCNTTNANNA AGNGANCNCN NCNTTNNTNA TATTNTTNNN 
GNNTNGNNGA NATNNNCN

AT4G04740.1

Model type: Protein coding
Short Description: calcium-dependent protein kinase 23
Curator Summary: member of Calcium Dependent Protein Kinase
Computational Description: calcium-dependent protein kinase 23 (CPK23); FUNCTIONS IN: in 6 functions; INVOLVED IN: response to cadmium ion, protein amino acid phosphorylation, N-terminal protein myristoylation; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 21 (TAIR:AT4G04720.1); Has 128755 Blast hits to 122983 proteins in 3953 species: Archae - 178; Bacteria - 14151; Metazoa - 46216; Fungi - 17196; Plants - 28127; Viruses - 447; Other Eukaryotes - 22440 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G04740.2

Model type: Protein coding
Short Description: calcium-dependent protein kinase 23
Curator Summary: member of Calcium Dependent Protein Kinase
Computational Description: calcium-dependent protein kinase 23 (CPK23); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 21 (TAIR:AT4G04720.1).
Link: InterPro Scan - TAIR