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11-0960-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 27141140 [Map]; Strand: w
      • AT1G72140.1 - [+] show detail - Major facilitator superfamily protein
        Distance: -674; Region: promoter
    Flanking Genome Sequence: 11-0960-1 - 5-prime edge 
    CACACAAGGC ATGCTGAGTA TCTACCTGAC CATCACCGTT GTCTGAGTGA 
    TATTAATTTC CGTTTTATTA AAAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 27141032 [Map]; Strand: w
      • AT1G72140.1 - [+] show detail - Major facilitator superfamily protein
        Distance: -782; Region: promoter
    Flanking Genome Sequence: 11-0960-1 - 3-prime edge 
    CTTGTGTGGT TACTTAAATA TGTAATCAAC TTTGAAAGTT ACAGAGAGTA 
    AGCTGCTACG TAGTTAATTT CGGGTCCAGC TGGCAGAGAA CGTGCATGGT 
    GTTGTTCTGT GTGAGACAAT CAATTTTTGG GCAAGCNTGT GTATATATCC 
    GAAAGACCTA CTCATATTTT TTTTAATTTT TTTTGGGGGG CAACTAGAGA 
    ACCTACTCAT CTTTAAAGTT TCCGTTTATT ACTAAACTTT ATTTAAATAT 
    ATGTGTTTTC TAGCTAGCTT ATGCCATTTT GTATAACATG CTAGCCTGGT 
    TTACCCCTAT AGTGTGGGGT TGTTCTTTTC TAGTAGTTCA ACCAAACGAC 
    AGCGACTAGG AAACTGAAAG GCCCAAATGC TTTCCTACAC CAACAGTCAT 
    AAGTAAAGCT GTTTCAAAAT TTTACTTCAA AAATAAAGGC GCAGCAACCA 
    AAAATTGAGC TGCCATATTC GCTGAAAAAA TTCAGCGCTA AATGTTAATC 
    AACAGTGCTT GCTGTCGCGT TAGTCTCAGT GTATCGCTCG AGTTGTTATT 
    TAACATTGCC CTGGTCACAT TAACCTGTCC ATTTTGGCTC CTTGCTTTGT 
    GAAAAAAGTA TGANATTGTG CACATACAAT ANCATANACT AANCAAGTCA 
    NCCNCATGGG ACAAGCTACC ANCCCGGGCC GNNNACCACC CGGCCCNTNT 
    A

AT1G72140.1

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G22540.1); Has 7231 Blast hits to 7080 proteins in 1330 species: Archae - 0; Bacteria - 3541; Metazoa - 585; Fungi - 456; Plants - 2171; Viruses - 0; Other Eukaryotes - 478 (source: NCBI BLink).
Link
InterPro Scan - TAIR