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11-0964-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4859092 [Map]; Strand: w
      • AT1G14220.1 - [+] show detail - Ribonuclease T2 family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 11-0964-1 - 5-prime edge 
    CATGTTGGTC CATTACGGAT TCGGAGCATG TACCGTGTTT CTCCCATTCG 
    TGTTCCCAAA AGTTGAACCC TTCGTTGCTT GGACATGATA GTGTTGGCCA 
    ATTCTTTTTC AAACTACNTT ACGAGATCCG ATATCTATAC ATTCATATAC 
    ATGATAGCTA ATAATCGTTG TTTAAGAATT AGAAGAAAAA ATTACACTAT 
    CAATTATATA TACCTGAGAT CTATCAAATT GGCTATCGGG ATCACAATTT 
    GATGGCCATG AACCACCGTT ATAATTAGGC CATAGACCGT GGATACCAAA 
    ATCTGCAGCG GGTTTACCGG ATGTTGGATA GCAACAAGCA CGCGATGTAT 
    CGCAATAGGC TCCAGGCCAC TGCAGCAAAT TCATAAAATT TCACATTCAG 
    TTTATATATG TACTTTGTCA AAAAGAATGA ATAAAATGAT TACTGGATCT 
    TAGTTTAAAC CAGAATATAT ATACCTGAAG AACGAAGTAG AAGAAATCAA 
    AGTCTTCTTG AGGACGTGAA ACGAAAAGAC CTTGAAACAC TAGAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4858976 [Map]; Strand: w
      • AT1G14220.1 - [+] show detail - Ribonuclease T2 family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 11-0964-1 - 3-prime edge 
    CCAACATGAG TACTTTGAAA ATGCTCTTAA ACTCAAACAA AAAGCAAATC 
    TCCTCCAAAT CCTCAAAAAC TCCGGTATAT ACACTAATAA ATCACTATAT 
    AAATGTACTA TTCATGTGTA CATTTTAAAC TCACCAGTGA CCATTTTCTT 
    TTCGTAAATG TAGGAATTAA TCCGGATGAT GGATTCTACA ATCTGGATAA 
    GATCACCAAC GCGATAAAAG ATGGAATTGG ATTTACGCCA GGAATAGAAT 
    GTAACAAAGA TCCGGAGCGT AATGCCCAGC TTCATCAGAT CTATATTTGT 
    GTTGATACGT CAGGAACTGA GTTTATCGAA TGTCCAGTTT TGCCTAGAGG 
    AAGCTGTCCA TCTCAAATCC AGTTTTCTAA GTTCTAATTT ATATCTTTAC 
    GTGTTTTCAG TTTCGTTGTT ATGGTAGATC TTAATTATGT ATTTTTGCTA 
    AAAGTCTTAA TTATGTATTT ATGTGTCTCT TATCTTGTTA TCTTTTGTAA 
    CTTCTCTTCT CCTTTTTAGA GTCCAAACCA AATTCATGGG GATTCTAAAA 
    TCTAAAATTC AAATAAGATA AACCTTCGTA TATTGGTAAA ATTCCTAATG 
    CATCATACGT TTCATAAAAC TTCAGCCCTA ATGGCTAATG CATAAGTTTA 
    ACAGAATTTG GTCAGTCACG GTACAATAGT TTTTTAATAA TGTGCTAAAG 
    TATTATTTAG TTTAGTATTA TAGAAACAAT AATCGGAATG TAGTAGAATC 
    GTTTAATCTC CTTTTGAGGG CAT

AT1G14220.1

Model type
Protein coding
Short Description
Ribonuclease T2 family protein
Computational Description
Ribonuclease T2 family protein; FUNCTIONS IN: ribonuclease T2 activity, endoribonuclease activity, RNA binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell, root, egg cell; CONTAINS InterPro DOMAIN/s: Ribonuclease T2 (InterPro:IPR001568), Ribonuclease T2, active site (InterPro:IPR018188); BEST Arabidopsis thaliana protein match is: ribonuclease 3 (TAIR:AT1G26820.1); Has 2564 Blast hits to 2563 proteins in 502 species: Archae - 0; Bacteria - 420; Metazoa - 283; Fungi - 235; Plants - 1517; Viruses - 7; Other Eukaryotes - 102 (source: NCBI BLink).
Link
InterPro Scan - TAIR