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11-0973-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21240593 [Map]; Strand: c
      • AT3G57400.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-ter...
        Distance: 365; Region: intergenic
      • AT3G57410.1 - [+] show detail - villin 3
        Distance: 2543; Region: intergenic
    Flanking Genome Sequence: 11-0973-1 - 5-prime edge 
    GCATCATCAT AATTGTCTTC TAAAGGCGTC TCTCCTTTCA TAGACTGACT 
    AATTAGCCCG AGTCAGTCAT CATAGGTTAT CGTGGTATGT TATCTAAAGT 
    TTTATTTTAA ATTATAGTAC TATGCATTCT CTCCTGATTT TTTAGGTCTA 
    GTGAAGACTT TCATTCTATA AATCGGACAA GATTTTTGGT TTTATACCAT 
    TTTCTAAAAA AATGTTAAAA TATTGCAAAA CATAGAAATC ATAACAATTT 
    ATTTAATATA TTGTATTTTT AAGATACATA TATATATTCC GTTACAATCA 
    GGTATTTGTA ATTTTGTAGC CCACATCGTT AGGAATCAAA GTTTGTGGAG 
    TTTATCTATC TACACATATT GAGAATCAAT TATATATATC CCAGAAGAAA 
    ATAATTTCGA GATTTCTAGC AAAATAAATA AAATACAAAA AACGGTCCAT 
    TACCGACAAT TTCTATATAA AATCCAAAAA ATAATGGTAT TTTGCTGATT 
    TTATCAAATG ATTATTTCGA AGGAGACCAA ATCAATAATG AATACAGACC 
    GTGGACACAC TAATAAAAAC ATCTGTGAAA AATCAAAAAT CTAAAGGAAC 
    ATAAAAANGT CAAATGTGTA CAAAACTTTC AAACAAATAA ATTAAAATTT 
    CCCCTATNTT TTTNGGTNCG GAAACTCTTN AAAATAAGNG CTACGGGCAT 
    NTAACNGAAA ANTCTANTGC NCAAGAANAA AAACGGTTTA

AT3G57400.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52500.1); Has 38 Blast hits to 38 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G57410.1

Model type
Protein coding
Short Description
villin 3
Curator Summary
Encodes a protein with high homology to animal villin. VLN3 is a Ca2+-regulated villin involved in actin filament bundling.
Computational Description
villin 3 (VLN3); FUNCTIONS IN: actin binding; INVOLVED IN: cytoskeleton organization; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Gelsolin (InterPro:IPR007122), Villin headpiece (InterPro:IPR003128), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: villin 2 (TAIR:AT2G41740.1); Has 7542 Blast hits to 2948 proteins in 413 species: Archae - 0; Bacteria - 496; Metazoa - 2427; Fungi - 350; Plants - 307; Viruses - 25; Other Eukaryotes - 3937 (source: NCBI BLink).
Link
InterPro Scan - TAIR