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11-0976-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25269439 [Map]; Strand: c
      • AT5G62960.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 11-0976-1 - 5-prime edge 
    GATGCCAAGC ATCTTTTAAC TCTGTATATG AAGATGGAGA TAACAATGAT 
    GAAGACGATG AGACCATTTT GATAAAGTTT CAGTCTTTGA GAGAGAAAAG 
    ATAAGTTTAT CTTCAATGTT GAAGGGAAAA AAAAAAACCC GGNTGNAAAA 
    AAACCAAAAC CNNNTTAAAA NNGGGGGGGG GGNTTTNTNG GGCTTNATTT 
    TTTTGGNCCA NTAAATTTAA AAAAANTTTT TAAAACCAAA ANTTTGGGGA 
    NTTNNAANNN TNNNGGGGGG GGTTTNAANT TTTTCCCNAN CCNNGGGGNN 
    AANTTTAAAT TTCCCNCCCN GGNCCGGNAN NCNCCCNNNC CCTTTNGGNN 
    GTCCNNTTNN NNNGGNNGGG GTNGNNCTNN ANGCGNNNGN GCGGNCCGGG 
    CGNNCCCNNG CCNCNCCCCC CCCNNCCNNC NNNTNTANNN NNNCNCNNNN 
    CCAGANAGNN NNNNANNNNG NNCNNGNNGN AGTNCTNNNC CNNNNNCNNN 
    GCNNGNCNNT CCNGTGCCNG NGCNNGGNCG GGNGCGCGCN TCCGNTCGNG 
    GTCGNGNGNN TGGAGAGCNC GNCNACCGNG NNCNGNNGAN CNNNNNCNGN 
    ACGCNNNCNA GTGNGCGGGN CGCNNCGTNN NGGGCGNGNG TCNCCGNTNC 
    GCTGTGCGNN NNGTNCGGTN NGNCGNNNAT CNNATANTCN CNTGCCCGTC 
    GATNCNCGNN GNNCNGGCAC NANNGNCNNC GANNCCGGNG NGNNNGGCNG 
    CNNNNAG

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25269555 [Map]; Strand: c
      • AT5G62960.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-0976-1 - 3-prime edge 
    TTGGCATCCA TCAACAACAG CGAACACAAC AGAATCAAGC TACTGGTTTA 
    ATTGGAGGGT TATGATCTGC TGCATATGGA TGGCTATAGC GACTGTGATC 
    ACAGCTTTTC TTATATTCAA ATACGAAGGT TTTCGTCGGA AACGAAGTGA 
    CNGTTGGTGA AGTTGACGGA GGAGAGAAAG AGTGGTCGGG AAATGTATAT 
    GAAGACGAGA CATGGAGGCC TTGTCTTCGT AATATTCATC CAGCTTGGCT 
    TCTTGCTTTC CGAGTTGTTG CCTTCTTCGT TCTTCTTGTT ATGTTGATTG 
    TTATCGGCCT TGTTGATGGA CCTACCATCT TCTTCTACTA CACACAGTAT 
    GCTTTCTCTC TTTCTTTTTA GATTTCATTT TTGGAAAAAA TTGATACTTT 
    TCTTGAATCG TTTAGTGGGG TGATTAAAGA CTTTGTAGGT TCTTGATAAT 
    GTTATTTTGN TTTTGTTTTG GTTTACGGTC TTAGAAACGT TTTGTNTATN 
    ATTGAAGATT TTTGGAGGGT CANAANCATA GATTCAAGAG TGTGATATTC 
    TTGGTTTACA AAAAAATTAA ACCTTTCCTT GAATTNTTGA ATTGGGGAAA 
    TGGAAGGATT TTGCAGGTCC CCTNCCATAA NATGGTAGAT ACNTTCCTGG 
    ATTAAGANNN CAAATTTNTC CCATTTCTTT GTNNCAGATT TNCNGGGGGG 
    TTTNNNAACC NTAATTGAAN TAAGTNANTG GNNAATTAAN GTTTNTNCNG 
    CNTNTNCNNA GCATGTNNNG GCNAGNATN

AT5G62960.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR