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11-0987-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17559468 [Map]; Strand: c
      • AT4G37310.1 - [+] show detail - cytochrome P450, family 81, subfamily H, polypeptide 1
        Distance: -525; Region: promoter
    Flanking Genome Sequence: 11-0987-1 - 5-prime edge 
    CTCTTAAAAG TACTGGGCAT GTGTTGGGCC TCGTCAAACT GCTGTCTTTC 
    TCTGCATTTT AAATTAAATA CCCATTAACA AATCGGTATA TATGTTCTTT 
    AGTTCTCCAC TGTCTGAACT AGTAATTCAC CATAAGCTAA AAGTTTTTTA 
    TTTATTTTTT GTTGATAAAG AACCGTCGTG AAAAACGAAA AGTTTGGATT 
    TCATGTTACT GTTGGTACCG AATCTGCCAC GTTTTGATGA TTATAGTTGT 
    AGAAAATGTC AACCAAGCAA TATTATTGTA AAGACAATAA TGGATGGAAA 
    TCTAAGAATT TCGATTGGAT TTTTATCTTA TCGAGAACTT TCAACAAAAC 
    CTTTTGGATT GATCAATTGA AAGAGACATA AGTGGTTATA TATAAACTTG 
    TTCACGACAC TCCAATGTGA TATGATTTTT TTGTTTGTTT GTCAAATTCA 
    TTGGTTACTT GTCTTATAGG AATTTTCCTT ATTCTACAAN GNCAAANGAA 
    AGAAAAGAAA AGAAAATTGG GTGCTTGTTT TTCCAAATTA GTATGCTAAT 
    TTTATCACTA TTGNATGCAC TATTTTTGTT ATTTGACTTT GNAATGCATG 
    ATTAANGANN GGTTNAAAAT CAGTATNTTA TACAAATATA TTTTTAATAG 
    ACGNCCGGNG GAGAAACCAA ANTATNCCCA AANTTNGAGA AAAAANNANC 
    AGAANNGGAG TCNTNNTTGG ATTGNAATNT ACTTATTNNT GANCACTCTT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17909850 [Map]; Strand: w
      • AT4G38180.1 - [+] show detail - FAR1-related sequence 5
        Distance: -173; Region: promoter
    Flanking Genome Sequence: 11-0987-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TATTTTACGG 
    TAAGCGTAAA AGAGGATGGG CCTTATAAAG TAAATGAAGA GGGAGTGGGC 
    CTTATAAAAT TATAAATGAA GAAGGAATGG GCCTTATAAA ATAAATGAAG 
    AAGGAATGGG CCTTGCTTAA ATTAAAAAAA GAGAATTAGA AGCACCGTCT 
    GTCTTCCTCC TCCGTGCCCT CCGACGACTC TATTCCCAGT CTCCCTCCTC 
    CGTCGTCTCT CATCTTCCTT TTCATTCTTC GGTTATTATA ACGTAATCAA 
    TTACAAGTTC CCTTATCTCT TCTTTTCTGG TTTCTCCCGC GCACGAACGC 
    GCATTCCCTC GTCTTCGCTG CCTCCCAATC TCAATCTCAG ACTTGAAATC 
    AAATCACGAC TGTAAGTGGT TCTATCTACA GTAGCTAGCT ATTTCATCCT 
    GTTGTGGACA ATAGATAGAT AGAATT

AT4G37310.1

Model type
Protein coding
Short Description
cytochrome P450, family 81, subfamily H, polypeptide 1
Curator Summary
member of CYP81H
Computational Description
"cytochrome P450, family 81, subfamily H, polypeptide 1" (CYP81H1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily D, polypeptide 5 (TAIR:AT4G37320.1); Has 33392 Blast hits to 33202 proteins in 1712 species: Archae - 63; Bacteria - 4035; Metazoa - 11608; Fungi - 7041; Plants - 9430; Viruses - 3; Other Eukaryotes - 1212 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G38180.1

Model type
Protein coding
Short Description
FAR1-related sequence 5
Computational Description
FAR1-related sequence 5 (FRS5); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Transcription factor, FAR1-related (InterPro:IPR004330), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: FAR1-related sequence 3 (TAIR:AT2G27110.2); Has 1793 Blast hits to 1580 proteins in 47 species: Archae - 2; Bacteria - 0; Metazoa - 4; Fungi - 136; Plants - 1646; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link
InterPro Scan - TAIR