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Mutant Lines
11-0994-1

11-0994-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 72155 [Map]; Strand: c
- AT1G01150.1 - [+] show detail - Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain
  Distance: -17; Region: promoter
- AT1G01160.1 - [+] show detail - GRF1-interacting factor 2
  Distance: -184; Region: promoter
- AT1G01160.2 - [+] show detail - GRF1-interacting factor 2
  Distance: -202; Region: promoter

GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCAC TTTCTTCCTT CTTCGCCTAA ATTCGAAATT 
TCGAAACCTC AGACACACTT ACAGAGAGAC CAAACGGTAA CATACAGTAG 
CTTCTTTTTC TTATTCGTTA AGAAATCTCA CGTAAACCCT TCGAATTTCT 
CAAATCTTCA CTCGGAATCT GAAAAAAAAT GGTGAGTGAT CTCCCGCTTG 
ATGAAGATGA TATCGCTCTC CTCAAGAGTC CTTATGTAAG CACCCCTTTT 
AGAAGAAACC TTTAATTTAT TTTTTCTCGA ATTTTAGTCT TTACTCGGAT 
GTCGCTTGTG ATACGTTAGA GAACAATTTG ATATTTTTTA CTGTGTAATT 
AGAACAAATT ATGTCTTAAT TGGTCTTAGA TAACCTTAAA TTGGTCGATT 
TAGTTCAATT TTGTGTAAAC ACTCTTACTT GGATTTATCT TCTTCTCTAT 
CTTAGATAGG NGAAATTGTT GAANAAATTG GCTTTGTGAG AGAAAAGCGC 
ATTGCTCATT GTATTGTTCA NTGTGATGAT GGTGGTGATG AGGACGTCAA 
CTCTGCTCCA AACATTTTCA CTTATGATAA TGGGCCTNTT AAGAAGCGCC 
NCTCCTTGGG ACAAGTGACA CTTTCAGAAG CTACCNGCCN GGGCCGGNNA 
CCCGCGGNCC CCANA

3 prime edge [+] show sequence

Chromosome: 1; Position: 72150 [Map]; Strand: c
- AT1G01150.1 - [+] show detail - Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain
  Distance: -12; Region: promoter
- AT1G01160.1 - [+] show detail - GRF1-interacting factor 2
  Distance: -189; Region: promoter
- AT1G01160.2 - [+] show detail - GRF1-interacting factor 2
  Distance: -207; Region: promoter

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCGT 
GAGAAGAAAC TGACTCAATG TAGTACTTTG CAATGTAACT TTCTCGATGG 
TCCATGGGCC TTAGAACCGT CTTAGGCCCA AATATGTCCT TTTTTCCCAT 
TGGCCCAAAT ATATCCAAAA CTTTCTAATT TGGTTAGAGG TTGCTCGTTG 
CTGTATTAAT TAATGTTTTA TGTTTTCGTT TAGAGTTTTG TAAAGACAAA 
TTAGAGAGAG AGAGAGAGAG ACAGAGGCAT TTTTGGTCAT AAAATCCACA 
CAGAGGNGGT TCGACATCCA GGTGAATCCA AGTAATAAAT NGCNGGATTC 
TCTCTCTATA ATATATATAG ATATAGCTNG CAATCATTTC CTGCGTNTGG 
ATCGGTCTGG GTTTTGTNGA GGGTTTTTTG GGGAAGACAA AATTAGGGTT 
TAGTNGGGGC AAAGTAAGTA GTAAANAAAA AGAAGATGCA GCAGCAGCAG 
TCTCCGCAAA TGTTTCCGAT GGTTCCGTNG ATTCCCCCTG CTAACAACAT 
CNCTACCGAA CAGATCCAAA GGGTTCCTTC TTTCTCACCN TATATCTCTC 
CCTCTCTCTT AATNNGNCAA CACTACTTAN GAGGCTCTTA GAGCTTTTTT 
GNACTGACAA AANNATNGNC TTNTGAGNGC AANNAATACT CTTTTGACTG 
NNATGGGGGN ANNNGGGGTT NCNTTNGNAA CTTTCNNNNN AANTNCCACN 
NCACTTNAAA AATNTTTTTT TNNNTNATNA NAAAAAAAAA NANNTNNNAG 
NCNNGGAANN NNNNNAN

AT1G01150.1

Model type: Protein coding
Short Description: Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain
Computational Description: Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Homeodomain-related (InterPro:IPR012287), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: TRF-like 10 (TAIR:AT5G03780.1); Has 94 Blast hits to 77 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G01160.1

Model type: Protein coding
Short Description: GRF1-interacting factor 2
Curator Summary: Arabidopsis thaliana GRF1-interacting factor 2 (GIF2) mRNA
Computational Description: GRF1-interacting factor 2 (GIF2); CONTAINS InterPro DOMAIN/s: SSXT (InterPro:IPR007726); BEST Arabidopsis thaliana protein match is: GRF1-interacting factor 3 (TAIR:AT4G00850.1); Has 425 Blast hits to 425 proteins in 91 species: Archae - 0; Bacteria - 4; Metazoa - 291; Fungi - 20; Plants - 89; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G01160.2

Model type: Protein coding
Short Description: GRF1-interacting factor 2
Curator Summary: Arabidopsis thaliana GRF1-interacting factor 2 (GIF2) mRNA
Computational Description: GRF1-interacting factor 2 (GIF2); FUNCTIONS IN: protein binding, transcription coactivator activity; INVOLVED IN: cell proliferation, leaf development; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SSXT (InterPro:IPR007726); BEST Arabidopsis thaliana protein match is: GRF1-interacting factor 3 (TAIR:AT4G00850.1); Has 35 Blast hits to 35 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 5; Plants - 17; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link: InterPro Scan - TAIR