1. Home
  2. Mutant Lines
  3. 11-1003-1

11-1003-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 4873176 [Map]; Strand: c
      • AT5G15050.1 - [+] show detail - Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-1003-1 - 5-prime edge 
    AATCCAGTAT CCGTCTCACT CACCGTCTCC GTCTCTCCTC CTCCGCCGCC 
    ACGTCTCGCT TATCTAATCT CCGGCTCCTC TGGTGACGGT CAGATGCTGA 
    AACGAACTCT AATGGCGCNT TTATCATCCC AACAACCAGT ACGTTGTTCA 
    TCTCGATCGG GAATCTTCAC CGGAGGAACG ATTGGATCTC AGTGGTTTTG 
    TAGCGAATCA AACTCTGTTT CAGAGATTTC AAAATGTTCG GATGATTGTT 
    AAGGCTAATT TCGTTACGTA TCGTGGTCCA ACTATGGTGG CTAATACGCT 
    TCACGCTGCA GCGATTTTGC TTCGTGAAGG TGGTGATTGG GATTGGTTCA 
    TCAATCTCAG TGCCTCTGAT TATCCTCTCG TAACACAAGA TGGTAACGAA 
    ATTTAGATCT TATAATCTCA AACTCTGTTG ATTGTTTTTG TTGAATCATT 
    TGAGGTTTAT TATGTCGATT CNATTTTCAN ATTTGNTGGA TACGTNTTTC 
    NTATCTTNCT CGAGATNTAA TNNCATATGA TCNTNNAACC AACANNGGCN 
    GGNAANANNG NNGNTNAGCN ANNGAGCATT ACNNTCTANN ANNAGNNAGN 
    NNNTGNCNAC TNNCTCTNNT NNNGNGCGNA NNCNNGNNTA GGNNNNANGN 
    AGCANNGGNN NNNTNNNGNN AGNGNNNNGC NNNNGCGNAA AAANGGNNAN 
    GNCNNNNNGG GTTNNNNAAA ANANGNNCNG NNNCGTGNNN NNGNNAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 4873292 [Map]; Strand: c
      • AT5G15050.1 - [+] show detail - Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-1003-1 - 3-prime edge 
    ACTGGATTTA TCTTGGATTC GACGAAGACG GAGGATCTAA ATCCGTAAAC 
    TGAAAATGGA ATCAAACGAG TTTGACCAGA AGAAGAAGCT AAGTTCGTTA 
    GCAACAAGAG AAACAGAGAA CAAATGGATC

AT5G15050.1

Model type
Protein coding
Short Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
Computational Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G39990.1); Has 926 Blast hits to 925 proteins in 118 species: Archae - 0; Bacteria - 49; Metazoa - 525; Fungi - 0; Plants - 316; Viruses - 14; Other Eukaryotes - 22 (source: NCBI BLink).
Link
InterPro Scan - TAIR