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11-1007-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 18951068 [Map]; Strand: c
      • AT2G46080.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST...
        Distance: -963; Region: promoter
      • AT2G46090.1 - [+] show detail - Diacylglycerol kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-1007-1 - 5-prime edge 
    GATAAACTAA CAAAATCGGT TATACGATAA CGGTCGGTAC GGGATTTTCC 
    CATCCTACTT TCATCCCGGA GGCCGGAGGA GGAGACGACG GCGGCGGCAT 
    CGCCACCACC ACCACCGCGA AAGGTGAAGC GATCAGAGGT AATACGTTGC 
    TGTTTCCTAA GGAAAGAAGG TTGTTTCGCC GTGAAAGGGC AAAATGGAGT 
    GCAGCAAGTG GATCGTAGCA TTGTATGGCC GCAATTTAGC TCCGGTCATC 
    GCCGTTATCA AGTTCATCGC GCGATTAGAC ACTTACAGAG ACCTTCTGTT 
    TCAGCGAGAG GCTTTTTCAC AACGTTTATG GGCCGTTTTT TATCTTCAAA 
    GTTTTAAAAA GGCCTATTTT ATCTAGCACA ATGGTGGAGT TGTCTCAAAG 
    TCAATAAGGT ATTCAATATC GACGTAATTC GATTAGGAAT CTTTTGGGAA 
    AAATGCCCTT TGGACCTGAT GGCCCATAAA TTGAGGTAGC TATACCTAAT 
    GGGCTTAAAG AAACAAGAAA AACGATTGAG ATAAAGACNG CTCTTTAATC 
    TTTGNCCGGA TGTAAATTAA AAGTGGGGTC CATACTTTTG NNNACCNGGT 
    TTNNTNCCTT GACCNGCTGT TNTTTGGGCT TTGANGCCCA TNNTTTACNC 
    ANTTTTTNCA ANGAATTTCC NACCCNGGNG CGTNNACCAN NCNTGCCNNN 
    NNTNA

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 18951118 [Map]; Strand: c
      • AT2G46090.1 - [+] show detail - Diacylglycerol kinase family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 11-1007-1 - 3-prime edge 
    GGCCTCCGTG ATCTCGTTTT CGTCGTAAAC CCTCAAGGTG TGTTTGCCCT 
    TTTACTCACT GGATGAAAAA AAACTGAGAT TCGAAATTCA TTGGATTTAA 
    AAATGATGTT TTTAATATGA GAATCAATCT CGATGTGGAA TTGAGGTTTA 
    GTATTATCGT CTCTTGATTC TTTTCAATGT CTTTTATATG AGTCTAGGTG 
    CTAATGGTAG AACAGCTAAA GAATGGAAGA AGTTGCTTCC TCACCTTCGA 
    TCTCGTCTTG GTAAAGACTG TAATGTGAGT TTTTGATTCA CTTGCCTTTT 
    TGTGCCCCTG TGTTAGTGAT GCCATCTCCT TTCGCTTTCT TCAGTTCCTT 
    CAACTGAGTT TACGTGTCTT CTTGTTTGTT TCTCCAGGTA AGTGAATTAT 
    TAACATCGGG TCCTTCTCAT GCCATTGACA TTACAAGAGA GGTAAGGAGT 
    AGTGAAAGTA ATATACTACT TTGCTGGGTA CAGTATTCTC TGTCTTGTCG 
    ATTTGGTTTT ATGATGATCC TCTGTTGCTT CTAATTATCC TCTCAGGCTA 
    TAAGGGATGG TGCAGATGCT GTCATTGCGG TTGGAGGTGA TGGAACACTT 
    CATGANGGAG GAATTGCCAT TTTTGGTTGC TANAACTGCG CTCTGGANAT 
    TCTTANCTCC ACTCATTCTG TCCTTTTTTT TTTTTTCAAC NGGGGNNAAA 
    GGGNTNNTTT GGGGNGGGNA ACCCNNNGGN TTTNTCNGGG GGAAGCNTNN 
    NCNACNNNCN CG

AT2G46080.1

Model type
Protein coding
Computational Description
CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF793) (TAIR:AT1G01550.2); Has 153 Blast hits to 139 proteins in 20 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 150; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G46090.1

Model type
Protein coding
Short Description
Diacylglycerol kinase family protein
Curator Summary
Encodes a putative sphingosine kinase (SphK) containing the five conserved domains (C1-C5) previously identified in SphKs.
Computational Description
Diacylglycerol kinase family protein; FUNCTIONS IN: diacylglycerol kinase activity, D-erythro-sphingosine kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206), Conserved hypothetical protein CHP00147 (InterPro:IPR005218); BEST Arabidopsis thaliana protein match is: long-chain base (LCB) kinase 1 (TAIR:AT5G23450.2); Has 6078 Blast hits to 6077 proteins in 1657 species: Archae - 15; Bacteria - 4829; Metazoa - 327; Fungi - 124; Plants - 145; Viruses - 0; Other Eukaryotes - 638 (source: NCBI BLink).
Link
InterPro Scan - TAIR