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11-1025-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1287449 [Map]; Strand: w
      • AT1G04620.1 - [+] show detail - coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family
        Distance: -865; Region: promoter
    Flanking Genome Sequence: 11-1025-1 - 3-prime edge 
    GTAGTCTCTG TTGTTTATTT GTAGAATCAT AGAGAGTCGT GGAAGCATGT 
    TTTAGTTGTT ACTCTCGATT TCTTGTTGAT GTTGTGGTGT TATAAATTGA 
    GCGTTTTAAC CAATACAAGT TAGGAGATGG TTAGTATGTG ACTATGTGTT 
    AGTGGCCATG TATGTAGTTC GATCAGATAA TCTGAATGAT GTGCTAAAGA 
    GCTTGCATAG GAAGACTGCC TTTGTGTTAG CTTGCATAGA GACTTGTTGC 
    AATATATGAG ACTGAAAACT ATTATGTGAA AACTTTAATT TGTGTACAAA 
    TATTTTTAAC TCTTAAAATT AAACTAACAT TGTACCAATT AGCACATGAA 
    AGAAACACAN AATT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1287565 [Map]; Strand: w
      • AT1G04620.1 - [+] show detail - coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family
        Distance: -981; Region: promoter
    Flanking Genome Sequence: 11-1025-1 - 5-prime edge 
    GAGACTACAA TAGCATTACT CTAGTTACAA GCAGAACCTA GACAACATAA 
    CAAAAGCCAA TTCTTGATTC AGAACAAGGA ATGATGACTA ACTCAAAATG 
    ATTGTCAAAG AAACCCATTT CAATACTCTA AAATTGGAAA GCATCAATAT 
    AGCAAATGAT CATAAGTGGC TGATACAAGG TCCAAAGCAT GGATTACGAG 
    AAGAAAACGA TGGTAATCTT CAATCCGGCG ATGTCTACTT GCTCGATTCT 
    TCAGCCTCAC CACGATTTCA AAATGGCTGA TATTCAAAAC ACTCTCATTA 
    GACCTTCGTA CGACACCGGT GGCCGTGACT CACCGGATTA AAACAAATCG 
    CCGGTTTCGT CGGCGGATGA AACGGAAAAT TATCGGTCAC AGAAAAAATA 
    AACTCTCGCC TTTTTTTTTT GGGTTNNGAA AAAAAACNGG CNTCCAANAA 
    AAAAAGNANC CGNNNAANNT TTTTTTNNAC AAAAAAACCT NTCTCCANAG 
    ANNNNNGTTT NCTAAATTTT TTTNNNNGTN TNNAATTTTT TTNNGCCCAA 
    TCANCCCGNA NAACCCCTTA NTTTNGNTNA AANAACCCCC NCTNGGNGGG 
    GNCNNAAACC NNNNTCNNGG GGGGAATTTT GGGTTNATAN TNCTNACANT 
    NCNGAGCAAA AAANTTTTTN AGTNTTTTAN TTANCTNGAA NAGNCGCNAG 
    NNACCTNTCN TTTNTNNCGG NNACTNTN

AT1G04620.1

Model type
Protein coding
Short Description
coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family
Computational Description
coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family; FUNCTIONS IN: coenzyme F420 hydrogenase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Coenzyme F420 hydrogenase/dehydrogenase beta subunit, C-terminal (InterPro:IPR007525), Coenzyme F420 hydrogenase/dehydrogenase beta subunit, N-terminal (InterPro:IPR007516); Has 499 Blast hits to 498 proteins in 165 species: Archae - 202; Bacteria - 188; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink).
Link
InterPro Scan - TAIR