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11-1038-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 168639 [Map]; Strand: c
      • AT3G01435.1 - [+] show detail - Expressed protein
        Distance: -351; Region: promoter
      • AT3G01440.1 - [+] show detail - PsbQ-like 1
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-1038-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCA 
    TTAGGATTTG CTGTCTCAAT AGGTCTTACC GGAATTCTCG GCGAAAATAA 
    TGTTTCCTTG GCACAAGACA ATGGGTTTTG GATTGATGGT CCTCTTCCAA 
    TTCCTCCTAT TTACAACAGT AAGCGCCATT TTATATTCTT GATTGTTTCT 
    TTCTTCAAAT GTTTGAACAT TTTGAGTCAT ACAACTATTC AAGATGAGAA 
    TTCGATTTGG TAGAATCATT TGATTTCCGG TTTTGAATTC GTCCTCGATT 
    TGAATATACA GATATCGTGA ATGAGAAGAC GGGAACGAGA ACATTCATAA 
    AGAAAGGAGT GTATGTAGCG GATATCGGGA CGAAAGGAAG AATGTATAGA 
    GTTAAAAAGA ATGCTTTTGA TCTCTTGGCA ATGGAGGATT TGATCGGACC 
    AGATACTTTA AACTATGTGA AAAAGTACTT GAGGCTTAAA TCCACATTTT 
    TGTTTTACGA TTTCGACAAT CTCATCTCTG CTGCTGCCTC TGAAGACAAG 
    CAACCTCTCA CTGATTTAGC CAACAGATTG TTCGACAATT TCGAAAAGGT 
    AAGTGTACTA ATGAAGTCCT GGTTCGTTCA AACCGAAGAG ACTATTGTTT 
    TTTTAAAATT TCTTCTCTTT TCTGATATAT CCTATATGTT TATTTGTTGT 
    TTTCTTGGTG TTTCGACACA GCTTGAAGAT GCAGCTAAGA CGAAGAACTT 
    ANCAGAGACN GGATCGTGTT ATAAAGATAC AAAGTTTCTT CT

AT3G01435.1

Model type
Protein coding
Short Description
Expressed protein
Computational Description
Expressed protein; FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of transcription from RNA polymerase II promoter; LOCATED IN: mediator complex; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med11 (InterPro:IPR019404); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G01440.1

Model type
Protein coding
Short Description
PsbQ-like 1
Curator Summary
Encodes a subunit of the NAD(P)H complex located in the chloroplast thylakoid lumen.
Computational Description
PsbQ-like 1 (PQL1); FUNCTIONS IN: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity; INVOLVED IN: photosynthesis, light reaction, photosynthetic electron transport chain; LOCATED IN: in 7 components; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbQ (InterPro:IPR008797); BEST Arabidopsis thaliana protein match is: photosystem II subunit QA (TAIR:AT4G21280.1); Has 165 Blast hits to 165 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 165; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR