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11-1043-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 18530719 [Map]; Strand: w
      • AT4G39955.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-1043-1 - 3-prime edge
    CCCACTGCCA CATAGCGTTA GCTCCGATCC CGTGAAGGAG GAGGAGCGTG 
    GGCTTGGTGT GGATGTGAGT AAGTGGGATC
  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 18530835 [Map]; Strand: w
      • AT4G39955.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-1043-1 - 5-prime edge
    GCAGTGGGAC CGCTTCATCT GACCGTTATT ATCCCCCGCT TCAACAGTCT 
    ACTTACCAGG ACCTNATCTT CTTTGGCGAC TCCTACACCA CTCGTCCCGA
    CCGCTCAGAG TCTTTCCAGG CNGACTTGTG TCATGAAGGC GATGGATGCT
    TACGGTGTTA GGACCATGAC CGTCGCTGGC CTCAGCTACG GTGGTTTTGT
    GGCCTACTCC TTGGCGGCGC AGTTTAAGGA GAGGGTAGAT CGAGTTGTGC
    TAATATGCGC CGGTGTTGCT CTGGAGGAGA AAGACTCGGA GGATGGTATG
    TTCAAAGTGA AGAGCCCGGA GGAAGCGGCG GCTGTTTTGT TTCCTCAGTC
    TCCTTCGATG CTCCGGCGGC TTCTCCAGTT ATCTTTCTAT AAACCGCCGA
    TTTGGATC

AT4G39955.1

Model type
Protein coding
Short Description
alpha/beta-Hydrolases superfamily protein
Computational Description
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G09430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR