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11-1065-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1429215 [Map]; Strand: c
      • AT1G05000.2 - [+] show detail - Phosphotyrosine protein phosphatases superfamily protein
        Distance: 433; Region: intergenic
      • AT1G05010.1 - [+] show detail - ethylene-forming enzyme
        Distance: 1975; Region: intergenic
    Flanking Genome Sequence: 11-1065-1 - 3-prime edge 
    TTCGGGTCAA AGCGTCTTTG CAGCAACATG AGAAACAATT GTACACCAGA 
    GGGCTCATAA GAATCTTCGA GATTCGGATC GATTTTCTCA AAAACGCGAG 
    TTTTTTTTAT TTCTTCTAAA TCCTGATCTT CAACCTATGT ACCAATTTGT 
    GGTTTCTTAC ATATTATGTG CTCTTGGTTG TGGTATTATT AGGCATCAAG 
    ATATATGGGT AAAGAAAAGG TGTGTACTCT GTTTCAGAAA GATTATGCAG 
    CTCGGCTTTA TCTGATTGAG ACACTGTTGG GTTTAGAAGA AGCAGACAAG 
    TTCTTCAAAA GTATCCCTTC AAACATGATT GATTACTCCA CGCTCTTAAC 
    CTCTTACGCG AGATC

AT1G05000.2

Model type
Protein coding
Short Description
Phosphotyrosine protein phosphatases superfamily protein
Computational Description
Phosphotyrosine protein phosphatases superfamily protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: dephosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Protein-tyrosine phosphatase, dual specificity phosphatase, eukaryotic (InterPro:IPR020428), Protein-tyrosine phosphatase, SIW14-like (InterPro:IPR004861); BEST Arabidopsis thaliana protein match is: Phosphotyrosine protein phosphatases superfamily protein (TAIR:AT2G32960.1); Has 580 Blast hits to 572 proteins in 119 species: Archae - 0; Bacteria - 14; Metazoa - 1; Fungi - 314; Plants - 145; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G05010.1

Model type
Protein coding
Short Description
ethylene-forming enzyme
Curator Summary
Encodes 1-aminocyclopropane-1-carboxylate oxidase
Computational Description
ethylene-forming enzyme (EFE); FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate oxidase activity; INVOLVED IN: response to fungus, ethylene biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G12010.1); Has 8587 Blast hits to 8552 proteins in 1009 species: Archae - 0; Bacteria - 1142; Metazoa - 103; Fungi - 1035; Plants - 4924; Viruses - 0; Other Eukaryotes - 1383 (source: NCBI BLink).
Link
InterPro Scan - TAIR