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11-1092-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1337617 [Map]; Strand: c
      • AT1G04770.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 11-1092-1 - 5-prime edge 
    CTCACGGAGA CAGTCCTTAT GTCCGAGCGA AGCATGTTCA GGTAAATTTA 
    ATATACATAT GTGTGACTTT ATCAAAAGGA ATCGAGTTTA TATTGATTTT 
    TACTGAGATT TTGGATTTGA TGTTTGGTTC AGTTGGTGGA GAAAGATGCA 
    GAAGCAGCGA TAGAGTTGTT TTGGATAGCG ATTAAAGCGA GAGATAGAGT 
    TGATAGTGCT CTTAAAGACA TGGCCTTGTT AATGAAACAA CAGAACAGAG 
    CTGAAGAAGC CATTGACGCT ATTCAATCCT TTAGAGATCT TTGTTCAAGA 
    CAAGCTCAAG AGTCATTAGA CAATGTCCTC ATCGATCTAT ATAAGGTAAC 
    TAAACTCTGA CCGAGACCAT TCTCTTGTTT CTCTCGGTTA CCGTTTTATT 
    AGATAGTGAA ATTGACAAAC TTGGGATTCC GAATTTTGTT GAACAGAAAT 
    GTGGGAGAAT AGAAGAGCAA GTTGAGTTAT TGAAGCAAAA GCT

AT1G04770.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G48850.1); Has 226 Blast hits to 224 proteins in 29 species: Archae - 0; Bacteria - 22; Metazoa - 1; Fungi - 0; Plants - 173; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).
Link
InterPro Scan - TAIR