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11-1097-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 9463622 [Map]; Strand: w
      • AT4G16810.1 - [+] show detail - VEFS-Box of polycomb protein
        Distance: -1369; Region: intergenic
      • AT4G16820.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
        Distance: -3941; Region: intergenic
    Flanking Genome Sequence: 11-1097-1 - 3-prime edge 
    GATTATCACT ATTCGTACCA CCGCCGCCTC ACACTTTCTC CATTCAAAAC 
    CTAAATATAT GTACACATTA AAATAGGAAA ATATTTACAA AAATAGTTTA 
    GTTGTTAAGC ATTATTAATT TATTTCTAAT TTATCATTGA CACAAACTAG 
    GTTTTTCATA ACTTATATAA TTCTTTATGT TGAACTGACC AAACATCAAA 
    CACAATTGTA CAAAAATATG TACTCGTCGG TCACCAATGC TAATCGAGAT 
    C

AT4G16810.1

Model type
Protein coding
Short Description
VEFS-Box of polycomb protein
Computational Description
VEFS-Box of polycomb protein; CONTAINS InterPro DOMAIN/s: Polycomb protein, VEFS-Box (InterPro:IPR019135); BEST Arabidopsis thaliana protein match is: VEFS-Box of polycomb protein (TAIR:AT4G16845.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G16820.1

Model type
Protein coding
Short Description
alpha/beta-Hydrolases superfamily protein
Curator Summary
Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols.
Computational Description
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: galactolipase activity, triglyceride lipase activity, phospholipase A1 activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: sperm cell, cultured cell; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G44810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR