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11-1112-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 327808 [Map]; Strand: c
      • AT2G01740.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: 0; Region: exon1 (CDS)
      • AT2G01750.1 - [+] show detail - microtubule-associated proteins 70-3
        Distance: -281; Region: promoter
      • AT2G01750.2 - [+] show detail - microtubule-associated proteins 70-3
        Distance: -281; Region: promoter
    Flanking Genome Sequence: 11-1112-1 - 3-prime edge 
    GTCTGGGAGA TTCGAGGATT TTCTCAGGCG AGAAAGAAAT TGAAGAGCTT 
    CTCTGACCAT TCATGGACAT GGGTTTCTTC AGAAGATTCG AAAGGTTACA 
    ACTTTGAAAA GATTTTTAAA CATCAAAGCT AAATCTAACN GGAGAAGGCT 
    TAAACCCTAG AAGGTTAAAG AAGACCGTCG TTCGGTTCTA AACGACAGCG 
    TTTAATTGTA AGCT

AT2G01740.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G02150.1); Has 57588 Blast hits to 14618 proteins in 307 species: Archae - 5; Bacteria - 72; Metazoa - 670; Fungi - 805; Plants - 54302; Viruses - 0; Other Eukaryotes - 1734 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01750.1

Model type
Protein coding
Short Description
microtubule-associated proteins 70-3
Curator Summary
Encodes a microtubule associated protein (MAP70-3). Expressed in all tissues.
Computational Description
microtubule-associated proteins 70-3 (MAP70-3); FUNCTIONS IN: microtubule binding; INVOLVED IN: cytoskeleton organization; LOCATED IN: microtubule, plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Myosin II heavy chain-like (InterPro:IPR009768); BEST Arabidopsis thaliana protein match is: microtubule-associated proteins 70-4 (TAIR:AT1G14840.1); Has 32985 Blast hits to 20590 proteins in 1788 species: Archae - 429; Bacteria - 4222; Metazoa - 17320; Fungi - 2752; Plants - 1806; Viruses - 150; Other Eukaryotes - 6306 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01750.2

Model type
Protein coding
Short Description
microtubule-associated proteins 70-3
Curator Summary
Encodes a microtubule associated protein (MAP70-3). Expressed in all tissues.
Computational Description
microtubule-associated proteins 70-3 (MAP70-3); FUNCTIONS IN: microtubule binding; INVOLVED IN: cytoskeleton organization; LOCATED IN: microtubule; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Myosin II heavy chain-like (InterPro:IPR009768); BEST Arabidopsis thaliana protein match is: microtubule-associated proteins 70-4 (TAIR:AT1G14840.1).
Link
InterPro Scan - TAIR