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Mutant Lines
11-1121-1

11-1121-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 135904 [Map]; Strand: w
- AT1G01340.1 - [+] show detail - cyclic nucleotide gated channel 10
  Distance: -582; Region: promoter
- AT1G01340.2 - [+] show detail - cyclic nucleotide gated channel 10
  Distance: -73; Region: promoter
- AT1G01350.1 - [+] show detail - Zinc finger (CCCH-type/C3HC4-type RING finger) family protein
  Distance: -220; Region: promoter

GCGGTTACTT GTATCTCTCT CTGTATATTG TTTCCTGGAA AAGTAGTATA 
TGAGAATTTT ATTATACGAC AAAAAGGGAG GGAAAGAGGA ATATTATGCA 
ATTAAATATT ATAAAGTCTG TTCAATTGAA AATCATTTCA TAAAACAATT 
TCATTCAGAT GAATGACTTG GTCAAAGTCA GACGGCGAGA ATAAGCAAGT 
TGCCAAATTT TGAAGTACCG GGCCCATTAT GAATATTGAG CCCATTTAGA 
TTCATGACCC AAAATGAAGT AACCGCCCCA CCATATGTTC CTTATTTCTT 
TTCTCTCTCT TCACACTGAT TTATTTTCTG TCGGAAAATA CGGACGGCGT 
CGTCGTTCTT CTTGACGGTG TAGCTCACCG GCGACGATTT TTAGATTTTT 
TTTTAAAGGT AACATATTCT TCCTTGTGTT TAATCTCCAT ACTTTTGATC 
TACTTTTCGT TCTTGTTTAG TCTTTAGTGT TGTTCGAGCT TTTGTCTCCA 
ATTTCAATCA ATTCTAAGGG TTTTTAGATT CCAAATTTTG TAGCTTCCGT 
TGACACGTCG AGTTGTCGAA CTGTGTTTCG GATTGATCTT TCTGGAGCTT 
CTATTTCTGC TTCCTTATCT ACTGNGAATG AAATTGCCAC TGATATANAT 
AGTTAGCTAG GGTTTATTCG TGAGCTCGCG TAGATGAATT AGGAAGAATT 
ACCAGCCCGG C

3 prime edge [+] show sequence

Chromosome: 1; Position: 135840 [Map]; Strand: w
- AT1G01340.1 - [+] show detail - cyclic nucleotide gated channel 10
  Distance: -518; Region: promoter
- AT1G01340.2 - [+] show detail - cyclic nucleotide gated channel 10
  Distance: -9; Region: promoter
- AT1G01350.1 - [+] show detail - Zinc finger (CCCH-type/C3HC4-type RING finger) family protein
  Distance: -284; Region: promoter

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCG 
TGGTAACCGC CATATGAGTC TCTCTCTCTT TCCAGCGACG ACGGGACCAG 
TTGCTTGAAT TGAAGAAAAC GCCGTTCACC GACTTCCGTT TATTAGCCGA 
ATCTTACTAT CTCGCCGTTA CCTACTTCGT TTCAGGTTAG TTTGATGATA 
GAATTTTGAT TCCGATTTCC GTTTTTGTTC TTTTTCGTCT GAATTTATTT 
TGCTGTTTCT CAGAACCGAA ACGCTTAGAT ATATGTCTTT CGTTTATGGT 
CAATGTTTTT TTGAAATTTG GATTTCTTAT CTTTGATGAA CAGTGTTTTT 
AAGTTGTTCG TGTGGTTTCC ATTTATTGAG CAGGAATGGG TAGGAATTAC 
AGGATTTGGT ATAATCTAAT GTTAGGTGGA AATTGACTGA TTCTAGGTTC 
TCTAATTAAC CTTTTCAAGA AAGAAATATT TAAAAACACA TACACACAAC 
ACAATTGTAT TTGTAGTTAG GTGTCTACTT GCTTATTTTT AATTGGTATT 
GGGGATTATC ATTGTACGTA ATCATGTAGA AGAATT

AT1G01340.1

Model type: Protein coding
Short Description: cyclic nucleotide gated channel 10
Curator Summary: member of Cyclic nucleotide gated channel family
Computational Description: cyclic nucleotide gated channel 10 (CNGC10); FUNCTIONS IN: ion channel activity, cyclic nucleotide binding, calmodulin binding; INVOLVED IN: ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated channel 13 (TAIR:AT4G01010.1); Has 3364 Blast hits to 3209 proteins in 253 species: Archae - 0; Bacteria - 35; Metazoa - 1554; Fungi - 48; Plants - 1027; Viruses - 0; Other Eukaryotes - 700 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G01340.2

Model type: Protein coding
Short Description: cyclic nucleotide gated channel 10
Curator Summary: member of Cyclic nucleotide gated channel family
Computational Description: cyclic nucleotide gated channel 10 (CNGC10); FUNCTIONS IN: ion channel activity, cyclic nucleotide binding, calmodulin binding; INVOLVED IN: ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Cyclic nucleotide-binding-like (InterPro:IPR018490), Ion transport (InterPro:IPR005821), RmlC-like jelly roll fold (InterPro:IPR014710), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated channel 13 (TAIR:AT4G01010.1).
Link: InterPro Scan - TAIR

AT1G01350.1

Model type: Protein coding
Short Description: Zinc finger (CCCH-type/C3HC4-type RING finger) family protein
Computational Description: Zinc finger (CCCH-type/C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: Zinc finger (CCCH-type/C3HC4-type RING finger) family protein (TAIR:AT5G06420.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR