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11-1122-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 27712545 [Map]; Strand: c
      • AT1G73680.2 - [+] show detail - alpha dioxygenase
        Distance: -5027; Region: intergenic
      • AT1G73687.1 - [+] show detail - MIR159/MIR159A; miRNA
        Distance: 689; Region: intergenic
    Flanking Genome Sequence: 11-1122-1 - 5-prime edge 
    CGTAAACTAC AGCAAATTTT GTTATTATAG TTTGATTGAT AAAGAAATGG 
    TTTTAGGCAG AATAATTGAA ACTGAACCCT AGCTAAACAA TTTCTTTTAA 
    GGGAGTCATC ATGTAAACCA AATTTCACTT AAAAAAATGA TGTTTTAAAC 
    ATATAATTCG ACAATTTTTA GTTTACTAAA AAGATTATGA TTTTTGTTTG 
    TTTTAAATTT AATATTGTTA TACNTTCCAT AAACAAGTTA CATGTGCTAC 
    AGTTGTGAGT CTCGAACTTT GAGTCTCAAA TCCAAAAGAA ATCGAGATAC 
    AGTTATGTGC TAGTTTAAAG AGTAAACTTA CTCAAAAATA TCCGAAAAAC 
    ACAGGTAAAC TGATCCCAAA AACAAAATTC CGAAAACTTA GATCACCATG 
    TCGATCCGGT CCAAAAGTTT TCATAAGAAC TATCAACCAG CCTTCGATGT 
    TTCANACTTT CAGTCTATGG TTTCAGCACA ATAAGATAAT CTTGTAGACA 
    CATAGTATGT CTTCAAACAT GAGGTCTCTT GGTGTTGTAT GTGTAGAAAC 
    TTATTTGGCT GGTCTTGCCT TCGTTGCTAA ACTGGGATGT AGACATTTTC 
    ATTATTTTGA TTGTACTTTC GAAGTTTTCA AAATTGGGCC TCGTTTTTAT 
    GACCCTTCAT GGAAAAAATA AAGTTGTCAA TCTTCCTCTT ACNACAGAAG 
    ANGTCTGTTG CANATC

  • 3 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: 11-1122-1 - 3-prime edge 
    AGTTTACGTT CGATTTCAAA TTATATGGCC AACTCCTACA GGTGATCCGA 
    AAAGACATTC AATTTATTGA TATGTGTTAT TTTTATATCT TAATCTTAAC 
    TTTTATTAAC TTTTAATGTT CTTCAAGTTT ATAATCTTCA TTGTGTAAAG 
    ACAGGAATCA AGTACTCGAC TTGTTGAAGT AGTTCAACAT ATTGTTGTAC 
    GTAGAACAGA TTGTGGCACT ATCCGAGGGA TTTCGGTGAG TCCTCGAAAT 
    AAAAATCGGA TGATGTCAGA AAGAATTTTT ATCCAAACAT TAATTGGTCG 
    TGTCTTAGCA GACGATATAT ATATAGGTTC CCGATGTGTC GCCTTTCGAA 
    ATCAAGATC

AT1G73680.2

Model type
Protein coding
Short Description
alpha dioxygenase
Curator Summary
Encodes an alpha dioxygenase. Recombinant protein catalyzes the conversion of a wide range of fatty acids into 2(R)-hydroperoxy derivatives.
Computational Description
alpha dioxygenase (ALPHA DOX2); CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Haem peroxidase, animal (InterPro:IPR002007); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G01420.1).
Link
InterPro Scan - TAIR

AT1G73687.1

Model type
miRNA
Short Description
MIR159/MIR159A; miRNA
Curator Summary
Encodes a microRNA that targets several MYB family members. MicroRNAs are regulatory RNAs with a mature length of ~21-nucleotides that are processed from hairpin precursors by Dicer-like enzymes. MicroRNAs can negatively regulate gene expression by attenuating translation or by directing mRNA cleavage.Mature sequence: UUUGGAUUGAAGGGAGCUCUA. Functions redundantly with MIR159B. Plants that are doubly mutated for MIR159AB have curled leaves and reduced stature.
Link
InterPro Scan - TAIR