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11-1125-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 14058399 [Map]; Strand: w
      • AT4G28430.1 - [+] show detail - Reticulon family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 11-1125-1 - 5-prime edge 
    GGAGAAGCAC AGTTCTGTTC CTCTGTTAGC TTCTCCTAGT CCATCTTCAG 
    ATCAACGTAT GTCCTTCCTC TGTCTATTAG CTCATTCGAT TTCACTTTCG 
    TGCTCTAATA ATTGCTCAAT GATTTGTGTA ATTCAGCTAA AGATGTTTGT 
    CAAGGTGATT TAGAGCGGAT TAGAGAGAAT ATAAGCGATT TGATTATGTG 
    GAGAGATGTT GCGAAATCAA CACTTTGGTT TGGTTTTGGC TGTATATGTT 
    TCCTATCTAC TTGCTTTGCT GCTAAAGGAT TTAACTTTAG GTAACATTGA 
    TTTCTCTGTC AAGGTTTATC TTTCTAGCTT TAATCATTTT TCACATTCAT 
    GAGTTGATAA TGAAACTTTG TGTGGTTTGA AGTGTTTTCT CAGCGATCTC 
    CTATCTTGGA CTTTTGTTTC TTGGGGTATC GTTCTTGTCA AATACTCTTC 
    GCCAAAGGTA CAAACTTTTA AAGGTCCCAG TACATAAATA TCAGCTTGAA 
    CTGCAGTTGA CTGAAGTTTT TGATCCATTT GGTACCATAA AGGGTTACCT 
    GAAAGAAGCC CCGGAAAGAG CTTAAAATTG GGNTGAAGAT GATGGTTTAC 
    GANTAGCTAG ACAAAGGCTT CCCATCACCA ATTTANCAAA TTTCAAAGNC 
    NAANGAGCTN TTCTTTGGTN AAACCNCNAA GGANCCCCAA AAGAAAAATA 
    AACAANANTN TGNCATTNTN

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 14058283 [Map]; Strand: w
      • AT4G28430.1 - [+] show detail - Reticulon family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-1125-1 - 3-prime edge 
    GCTTCTCCTT CTTAGATCGA CCCAACTTCT TCTGTTTCCT CTGTTTTTGT 
    TTCTTTTCAT CGGTCACGAC AACAATTGGC TCCGTATTTT CCTTTGTATC 
    TACCATCGCC TCCGACCTAA GTCTCGACCT CCGGAAATTC CTCGGCGACN 
    GGCGAGGCCA AAAGACCATT TTGCCCTCCC TTTGTCTTAC TCCGTCGTGC 
    CGTCACAGCA GCCTCCGCAG CTTCCATATC GAACCGATTG CTTAAACGGG 
    TTCTCGATTT ACGAAGAGGG GAAGGAGATA AAAGGAGAAT CTCACGAAGA 
    GTAACAGGAG AAGATGGTGA ACTGAGAGAA ACAGGTGATG GGTAAGGAGT 
    ACCGTTGTTG TTCTTCGGAG ACGATAAAAC CAAATCGAGA GATGGAATGT 
    GAGATTTTAC GAGAGTTTTG TTGTTTCGAG CTAGACGCAA AGCGGATCTA 
    GTATTCGAAC GGAGAGAAGG AGGTGTGGTA GTAGAGTCCA TTGTATGAGA 
    AAGTTTTTTT TGGGAAAAAG AGAGAACTTT TTTCNAATCT GAAGTGATTA 
    AATGAGAGGA ATCTCTGGGA ATTTATTANG GTTCTTGAAG ATGTGATTTG 
    GGGATTCTTA ATTCCGACAA NTTAGAGCCT CTCTGCTTTT TTCTCCGGCT 
    ACTGTGGGAT CANANAGCCG TTGATGGAAN AANGAAAATN AAAANACAAA 
    TNTTTTTGCA TTTTTTAAAA TTTGGACCGG CGGNAAANGN GG

AT4G28430.1

Model type
Protein coding
Short Description
Reticulon family protein
Computational Description
Reticulon family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT2G20590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR