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Mutant Lines
11-1161-1

11-1161-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 1287755 [Map]; Strand: c
  - AT1G04620.1 - [+] show detail - coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family
    Distance: -1171; Region: intergenic
  - AT1G04625.1 - [+] show detail - Polynucleotidyl transferase, ribonuclease H-like superfamily protein
    Distance: 76; Region: intergenic
Flanking Genome Sequence: 11-1161-1 - 5-prime edge
```
GGTGAAAATG GATGGTGATC ATCGAGCTTT GACGTTCTCG TGATC
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 1287871 [Map]; Strand: c
- AT1G04625.1 - [+] show detail - Polynucleotidyl transferase, ribonuclease H-like superfamily protein
  Distance: 0; Region: exon3 (CDS)

TTTTCACCAC CGTCAGAACC GTCGGAACTG TAACTCGGTG ATCACACCAT 
CAATGATCTC GCCACCGTTT GTCTCTCTGT TTTCTTGCGT TTCACGATCT 
CTCTAGCAAA TCATGGCGGA TCTCACCGAG AGTCCCAAGT ATTGACGCAA 
ACCACGCGCC GTTGTCACGA GACTCAGGTA TGTTGCTTCT CGCTTAAATT 
CCTATTTGAT CTCTTGGAAC CTTGGATTTT TAATATTTAG TTTCTGCACA 
AAAAAGGTCT CTTTGAATTA GGTCAATCAA TATTTAGTTT TCTAACCGCA 
ATTTCATCGG AGGAACTAGG GTTTGATCTT GTAGTTTAGT TTTACAAAAT 
TGACCTAAAA TTGGTGGATA ATGTTACGAC AGAGCTACAC TAGGACTTTG 
GAATGGGCTT TGCTGTATGA GGCCTTCGTT ACACTAGGAC TTTCTTCATT 
CTAACTTTTT TTCTTCTTTT CTTTAAAAAT TATTTTAACC AAAACTAAAA 
CTTTCACTAA AACATTTAAA TAAATAATTT TTTAAAGGTT TTTTATAAAT 
ACTAAATTAA TATGACGTTG TGAAATCTAA CCGGATTTTG GATC

AT1G04620.1

Model type: Protein coding
Short Description: coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family
Computational Description: coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family; FUNCTIONS IN: coenzyme F420 hydrogenase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Coenzyme F420 hydrogenase/dehydrogenase beta subunit, C-terminal (InterPro:IPR007525), Coenzyme F420 hydrogenase/dehydrogenase beta subunit, N-terminal (InterPro:IPR007516); Has 499 Blast hits to 498 proteins in 165 species: Archae - 202; Bacteria - 188; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G04625.1

Model type: Protein coding
Short Description: Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Computational Description: Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT2G46460.1); Has 296 Blast hits to 296 proteins in 17 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 291; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link: InterPro Scan - TAIR