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11-1168-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1232431 [Map]; Strand: w
      • AT3G04570.1 - [+] show detail - AT-hook motif nuclear-localized protein 19
        Distance: 103; Region: intergenic
      • AT3G04580.1 - [+] show detail - Signal transduction histidine kinase, hybrid-type, ethylene sensor
        Distance: 2852; Region: intergenic
    Flanking Genome Sequence: 11-1168-1 - 3-prime edge 
    ACCCCAAGGT GTTCTAATTT AATGAGGATC GTCAATCATG TACACATGTA 
    TATATGTATG CACACTTAAC CTCACTATAA AAAATTGGAG AATCCAACAA 
    AGAGAAAAAC TTTTAATAAA AGATCATAAA AACACAAGTA AGCTAAGTGA 
    AATTTAGCAA ATAATAATCA TAGTCAAGAG AGAACATAAT ATAATGTCCA 
    CAAACTATAT AGCTCACTAG TAACAAGTAG CAACTGACTG GTTTTCATCA 
    TCATAATAAA CATCATTATA ATCTTATTGT TAACTTCTGT AAATTAAAAA 
    CCATTTTAAC GCACGTTAAA ATCCTGACCT AGCTTGAGCC CAACCATAAG 
    CT

AT3G04570.1

Model type
Protein coding
Short Description
AT-hook motif nuclear-localized protein 19
Computational Description
AT-hook motif nuclear-localized protein 19 (AHL19); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 20 (TAIR:AT4G14465.1); Has 7030 Blast hits to 3903 proteins in 396 species: Archae - 17; Bacteria - 3505; Metazoa - 1173; Fungi - 108; Plants - 1514; Viruses - 84; Other Eukaryotes - 629 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G04580.1

Model type
Protein coding
Short Description
Signal transduction histidine kinase, hybrid-type, ethylene sensor
Curator Summary
Ethylene receptor, subfamily 2. Has serine kinase activity.
Computational Description
ETHYLENE INSENSITIVE 4 (EIN4); FUNCTIONS IN: ethylene binding, protein histidine kinase activity, receptor activity, glycogen synthase kinase 3 activity; INVOLVED IN: negative regulation of ethylene mediated signaling pathway; LOCATED IN: endomembrane system, endoplasmic reticulum membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), ATPase-like, ATP-binding domain (InterPro:IPR003594), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: Signal transduction histidine kinase, hybrid-type, ethylene sensor (TAIR:AT3G23150.1); Has 63350 Blast hits to 57717 proteins in 2870 species: Archae - 286; Bacteria - 55528; Metazoa - 15; Fungi - 1532; Plants - 2041; Viruses - 18; Other Eukaryotes - 3930 (source: NCBI BLink).
Link
InterPro Scan - TAIR