1. Home
  2. Mutant Lines
  3. 11-1228-1

11-1228-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 10561174 [Map]; Strand: w
      • AT1G30090.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: 11-1228-1 - 5-prime edge 
    ACTAACACTA ACACTAATCA AATTTCCAGA TTCTGTAATA GAAATCGATT 
    GAACTAGAAT CCAAATTCCA ATTCAGTGGA TCAAACCCTA GAAGAAAGGG 
    GGCAAAGAGA AATCCACTAG AAGAAGCGAA ATCGATGAAG AAACAGAGAA 
    GCAAGAATCG ATAGAACAAG TGATCGAAGC TAAAAAACAT TAAAGGAAAG 
    ACAAAGATCA GATTTTTCAG ATTCTTACAG AACAACAAGG CGGCGATAGA 
    TAACACTGTC GTTTTGCTTC GTCGCGAATC TTTCAGCTCT TCCTCATTTT 
    TTTTTGTTTT GTTGTAAATN GGTAATCGAG AAGACGTAAA CCANAGTATA 
    TCTATTTATT CATTTTAATA TTTTAAGTAA CTGCTGCAAA TCTTTTAGNG 
    TANAANAATC TGTANATGTC CTAATGACAG TTCTTTTGTN GGATTAATTA 
    TTACTATCTT ATGAAGTTAA TTAANAATGA TACGTGCAAA TTAACAATNT 
    NCAAATATAA TTCCTTTTGC GAGTAATTAA TTCTATGAAA TGGGCTTAAT 
    AATGGGCCTA TACTATTATC ATTTGCCCAT ACAATATATG GGGTCTTGTT 
    ACATATGGGG GNGATACAAA GGTAAATTTT TAGTCTANAC CAAAATCTCA 
    AGTTCAGTTT TANATAACAT AACTTGTTTC T

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 10561058 [Map]; Strand: w
      • AT1G30090.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: 0; Region: exon2 (5UTR)
    Flanking Genome Sequence: 11-1228-1 - 3-prime edge 
    GTGTTAGTGA TGGTGCTGAT TCTCCATTTC AGGTTTAACA AGTGTAGAGG 
    AACCAAAGTT GAAAACTTTG AACTTCCCAT TGATTTTAAT GTTAATTACC 
    TGATCATTCG AATCTGAAAT TGAAGCATAT GAGTGCCTTA ATCTGTGAGT 
    GTTAGAAGAA GTAGAAGAAG ATGCAGAGGG TTAGGGTTTC ATCTCAAAGA 
    GCAGTTGTGC ATAAGCT

AT1G30090.1

Model type
Protein coding
Short Description
Galactose oxidase/kelch repeat superfamily protein
Computational Description
Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT2G24540.1); Has 6648 Blast hits to 4175 proteins in 221 species: Archae - 14; Bacteria - 391; Metazoa - 4969; Fungi - 0; Plants - 1047; Viruses - 9; Other Eukaryotes - 218 (source: NCBI BLink).
Link
InterPro Scan - TAIR