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Mutant Lines
11-1258-1

11-1258-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 2960123 [Map]; Strand: w
  - AT5G09530.1 - [+] show detail - hydroxyproline-rich glycoprotein family protein
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 11-1258-1 - 5-prime edge
```
CTTCAAAGTA GCTGGGCCTT CTCTTCGCTT AAGGAGTTCC GGGAACTTTT 
GGGAATT
```

3 prime edge [+] show sequence

Chromosome: 5; Position: 2960007 [Map]; Strand: w
- AT5G09530.1 - [+] show detail - hydroxyproline-rich glycoprotein family protein
  Distance: 0; Region: exon1 (3UTR)

CTTTGAAGCC CATCCCACAA TCTTAAAGTA CCGTTTTACC GTTATACCAT 
TTGTCTATTT GCAGAGATGC ACTTATGTCT GTCTACATCA TTGTTTCCTT 
AGTAAAAACC ATGTCGTATG GTTGGTCTCA TAGTCATAGT TCTTGTTTTT 
TTTTGGGTAA AGACTATACA CTTATACTTG TATAATTGTA TCCTGTTATA 
TTTTGTATTG TTNGTTTCCA TACAGATTTC GTTGTATTTG ATATACTTTT 
TAATTGATTA TGTTACTTAT TTAANACATG TTTCTGTTCA AAAGCTATAC 
AATGAGGTCT AATCCCTCAA TTATATCAGT TTAGCTGTTC TGATACTTTC 
NACGGCTATC TTCTTCTTGT TNGTTAATGC TACTACGCTA GCATCAAATG 
TTTGTCATCT TTTGGACGGA ATTATAACCT TTTTGTTGCT CTACAAAATT 
ACTAATCAAA TTCATATAAG TAAACATTAT GTAATGGATT NGAATATCAT 
AACCTAATGT AATTGATTGN GTTTCATATT ATTTACAAAT NTGGTNATCG 
TTTCTGTTAC GGNAATTGNG TTGATGGAAT TGATTGNGTT ANAAGGAATC 
ACTCCGNATT ATTTCGGGAA NACTTCGGNN TACTNTNCTC GAAGAAAANA 
TTTTCTTTTT NCAGNAGGTT GAATNAAACN NTGNNTTCTN GGNTTTAAAN

AT5G09530.1

Model type: Protein coding
Short Description: hydroxyproline-rich glycoprotein family protein
Computational Description: hydroxyproline-rich glycoprotein family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT5G09520.1); Has 56710 Blast hits to 18930 proteins in 1860 species: Archae - 251; Bacteria - 17598; Metazoa - 17723; Fungi - 4561; Plants - 6151; Viruses - 953; Other Eukaryotes - 9473 (source: NCBI BLink).
Link: InterPro Scan - TAIR