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Mutant Lines
11-1266-1

11-1266-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 26524142 [Map]; Strand: w
  - AT1G70370.1 - [+] show detail - polygalacturonase 2
    Distance: -8954; Region: intergenic
  - AT1G70380.1 - [+] show detail - F-box and associated interaction domains-containing protein
    Distance: 2070; Region: intergenic
Flanking Genome Sequence: 11-1266-1 - 5-prime edge
```
ATTGCCAATA TATGTGATGT ATAATTGCGG GATATATGTG ATTGATATCA 
TGACTTACCA CTTTATATTA TTATTTTTTT TATCAGAAAA ATCCGTACAG 
AAAAGTGAAA ATATTTTAAC NTTTTTTCAC AGATGAGTGT TATCAAATGT 
TTTAAAAGGT CAAAAAATAA TAATTAAAAA CTTGATTTGT GTACAATACA 
AAACTTCAAG TTTTTAGCAA TCACAAGCCT GAATTANACC AGGTGTAGCC 
AAAATTTACG TGGGCTGAGT TCAAACCTCA AAATAT
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 26524026 [Map]; Strand: w
- AT1G70370.1 - [+] show detail - polygalacturonase 2
  Distance: -8838; Region: intergenic
- AT1G70380.1 - [+] show detail - F-box and associated interaction domains-containing protein
  Distance: 2186; Region: intergenic

TTGGCAATTA TGAAAAGACG GACAAAAATA AAAGAGTTTC ACCATTATCT 
CCCACTANTT AAAAGTCTTT TGCATGAGTT AAACATTTTT TTATCATAAG 
TTTCAGAAGA AAAAAACATG ATAATGAAAT AAAGTTCTAA TAAATAAAGT 
GGCAAGCCAA TAGACTTGCG TGGTGGTATC CTACAACGGA AAAAAAAAAA 
AAAATTTTNC CCCTTTTNNT NNNNANCNNN NNAANNTTNN TTNTTTCCCC 
CCNTCCTTTN ANCCCCAAAA CCCNNNTCTN ANAANCNTNN CNCCCCNNTT 
TNNNNGGNNN GNGATNTTNN AANGNNGTCC TTCNCNCGGN CCNNCCCTTT 
TTTNCCATTN NTTTGCCNNT NNNNNCCTTT CCTNNTTTAT ANNGGNAATN 
TAGGNCCCCA AAANNTTTNG GGGANANAAC NCTTTTNGCG NANNNNCNCG 
NCANTNANNA GTAAAANNNT TNNNNNTNAT NNTTTCACNC NAACNGNGNN 
NAAAANNCCN GNCCNNTTTN CTGNGGGCTT TNNACNATAN NATNCGACAN 
NNGTGGTTTA NTNCTNNAGA ATTNANTTTT CNNNNNATNG ACTNNGTNTN 
CNNACACNTN AATNNCGTNT NCTTTNNNAC CNNNGGTTNN NACANGCCCT 
NNNGGNANAA AANCNNNTNA TANNNNNTGN NGGNNNNNNC ACCANCCNCN 
NANGGNCCTC CACCNCNNTT NGNNATNNNA CCN

AT1G70370.1

Model type: Protein coding
Short Description: polygalacturonase 2
Computational Description: polygalacturonase 2 (PG2); FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BURP (InterPro:IPR004873); BEST Arabidopsis thaliana protein match is: BURP domain-containing protein (TAIR:AT1G23760.1); Has 2933 Blast hits to 2085 proteins in 370 species: Archae - 9; Bacteria - 765; Metazoa - 357; Fungi - 320; Plants - 613; Viruses - 5; Other Eukaryotes - 864 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G70380.1

Model type: Protein coding
Short Description: F-box and associated interaction domains-containing protein
Computational Description: F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 3 (InterPro:IPR013187), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT1G70960.1); Has 1387 Blast hits to 1338 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1387; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR