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11-1293-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 25589718 [Map]; Strand: w
      • AT1G68270.1 - [+] show detail - AMP-dependent synthetase and ligase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-1293-1 - 5-prime edge 
    CCAGCAAGTT TAGTTGTAAG TCGTCACATG ATAGTAGATG GAGGATTTCT 
    CGAGCCAAGG GCTCAAAGTT TCGGTGTATG AATAATATCT TGGGCCTGGG 
    CGTGGCGGAG AATTGTGGTA ATAGATGTTG CGTCCAAACG AGTATTGATA 
    GGGTTAAGGA CAGCTCCAGC CATGGGAACG GCAAAGTGCA TCTCATAAAT 
    GGCTGGTGTG TTTGGGGCCA CAACGGATAC CTAAAAACAC ATTTATAATC 
    ACAAGCCTCA TATTTTATAT ATATGAATGT ATGTTTGTCT AATTATACAC 
    GTTAGTTACG CTCACACACT ATAGACCAAA CGGATATATT AAGAAAATAT 
    AAATCTGTTT AGCAAAACAT TTGGGGTAAC GATAGAGAGA GAGATAGAGA 
    GTGTGACATA CCACATCGTT CTTGGCGATG TTAAGAGAGA TGAGAGAAGC 
    GGCTAGACGA CAACAACGGT CATAGGTTTG TGGCCAAGTG AAACGAGTTT 
    GTCCGTAAAT TATTGATGTT CGATTGGGAT AACACTCTGA AGCTCTCTTC 
    AAGAAAGTTA TGGGCGTTAG AGGAACGTTG TTTGCTTCAC ATAACTCCAT 
    GTTATCCATC TTTTTCTTCT TCTTAATTTG TGTGTAATGA ATGTTTGTGT 
    GAGTGAANAG GGATATGCAA ACAATTACTA TTTCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 25589601 [Map]; Strand: w
      • AT1G68270.1 - [+] show detail - AMP-dependent synthetase and ligase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-1293-1 - 3-prime edge 
    TTGCTGGTCA TATTTATTGA CGAGTACAAT TCCGCTAAAA GGGTTTCATC 
    CGAGGAGTTA GACTACGAGA GTCTCATTCA GATGGGAGAG CCTACGTCTC 
    CGTTGGTTGA AAATATGTTC CGTATACAAA ATGAGCAAGA TCCCATCTCC 
    CTAAACTACA CGTCAGGTAC CACGGCTGAC CCAAAAGGTG TGGTGATTAG 
    CCATCGAGGA GCATATTTGA CCTCGTTAGG TGTAATTATT GGTTGGGAAA 
    TGAGTACCTG CCCTGTCTAC CTTTGGATTT TTGCCTATGT TTCATTGCAA 
    TGGATGGACG TTTACATGGG CAACAGCAGC GCGCGGGGGC ACCAATGTGT 
    GTATGAGCCA CGTGAGTGCC CCGGAGATCT ATGAGAACAT AGAAATGCAT 
    AGTGTGACAC ATATGTGTTG TGTTCCTACG GTCTTCAACA TTCTCCTACA 
    AGGAAATCCG CTTGACATGT CACATAGGTC TGGACCGGTC CATCTGATGA 
    CCGGAGGTTC ACCTCTCCCC GCTGCTCTTG TCAAGAAAGT TCAGCGGTTA 
    GGGTTTCAAG TTCTGCATGT CTATGGCCTG ACGGAGGCCA CTGGTCCAGC 
    TCTCTTTTGT GAGTGGCAAG ACGAGTGGAA CAGGTTTATA CTTATATATA 
    CAGTATTATA TTTCACATTT CGTTAACATT TACCAAAAAG TAATNGAACT

AT1G68270.1

Model type
Protein coding
Short Description
AMP-dependent synthetase and ligase family protein
Computational Description
AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl activating enzyme 12 (TAIR:AT1G65890.1); Has 75696 Blast hits to 66693 proteins in 3446 species: Archae - 1253; Bacteria - 49932; Metazoa - 3177; Fungi - 3138; Plants - 2055; Viruses - 1; Other Eukaryotes - 16140 (source: NCBI BLink).
Link
InterPro Scan - TAIR