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11-1337-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 122386 [Map]; Strand: c
      • AT2G01210.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: -540; Region: promoter
      • AT2G01220.1 - [+] show detail - Nucleotidylyl transferase superfamily protein
        Distance: -890; Region: promoter
      • AT2G01220.2 - [+] show detail - Nucleotidylyl transferase superfamily protein
        Distance: -890; Region: promoter
    Flanking Genome Sequence: 11-1337-1 - 5-prime edge
    NGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCAC AGATCAATCA AAGGACCCCA ATATATTACT
    TTTCGGAATA AAACAACAAT CATGACAAAA GGTATTAAAA GATGTAACTA
    TTTGAATAAA GATATCTGCA TTTGTAACAT TTTGTATATA GGAGAGATTA
    CAGAGACAAG TTGTTTTTTA CGAGCTATTA GCTTTATCGG AATAGTGCAA
    AACTGTTAGA AGAAACTGTA TTAAAAAAGC TCTACAAAAA AGCTAAAAGT
    AAAACCTTTT GTAACATTTT TGATAAAGTT TTTATGATTG ATTCAAAACT
    GTATAAAGCT
  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 122431 [Map]; Strand: c
      • AT2G01210.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: -585; Region: promoter
      • AT2G01220.1 - [+] show detail - Nucleotidylyl transferase superfamily protein
        Distance: -845; Region: promoter
      • AT2G01220.2 - [+] show detail - Nucleotidylyl transferase superfamily protein
        Distance: -845; Region: promoter
    Flanking Genome Sequence: 11-1337-1 - 3-prime edge
    CTGTGATCTG TCAAGTGTCA ATGTAGGTAA CATTTACAGT GTTTGTCCTT 
    TTCTATTAAT CTATCTTGTC AATATATTAC TACTACAGTA GTATCATTCA
    TTTTTTATTT CTTAGATGAT GTTGCTCTAG CACGAAACTC CATAAAATAC
    CAAGTGATGC ATATTAATAG AGTGTAGCAA GTGTAGTAAC AAGTAGTAAC
    GAGTGTAGTT TCAAATGAGC ATTGAACAAA CTAGTTGACG ATTGGGAGAG
    AGCAAACATA ACAGTGGAGT TTACTAGAGA AGAAAGGTGC CACAAGATAC
    CACCACGCTC TTCCTGCTTT CTTTATTCCT CGAGTCTGCT TTTACAGTAC
    TAGTACTACC TCTTTTATAT CTTACTTTAC CATATAAATC ACAGCTCATC
    TTTCTTATTT TACTTAGAAT AGTAGCTTGA CATGTTTTTT CGCAAGAAGA
    AGATTCATAT AATAAACGAT TATAAATGTG GTTTAGATTT AGCTAAAGCC
    TTAAAAGGGT AAAAGGAGAG GACATGTGTA CAAACATTAG TCCGGCCCTT
    ATTGTCGTTA TGGTGATACG ATAAAATTGT CGATAAGTAG ACTTGGTGAA
    GTGTGATGTC TCCTAGTTTC TTANGATAGA GAGCCCCCAA AAAACCCTAA
    CCCTAAACCC ANAGAGAGTG TGCCANAGTG GGCCTATTTT CTCCTCACGG
    ACTAACN

AT2G01210.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: chloroplast stroma, chloroplast, plasma membrane, plant-type cell wall; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G25320.1); Has 133812 Blast hits to 98087 proteins in 4104 species: Archae - 103; Bacteria - 11207; Metazoa - 34549; Fungi - 6957; Plants - 66297; Viruses - 188; Other Eukaryotes - 14511 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01220.1

Model type
Protein coding
Short Description
Nucleotidylyl transferase superfamily protein
Computational Description
Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.2); Has 432 Blast hits to 425 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 78; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01220.2

Model type
Protein coding
Short Description
Nucleotidylyl transferase superfamily protein
Computational Description
Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.1); Has 429 Blast hits to 422 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 76; Viruses - 0; Other Eukaryotes - 310 (source: NCBI BLink).
Link
InterPro Scan - TAIR