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11-1338-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 186792 [Map]; Strand: c
      • AT4G00430.1 - [+] show detail - plasma membrane intrinsic protein 1;4
        Distance: 0; Region: exon2 (CDS)
      • AT4G00430.2 - [+] show detail - plasma membrane intrinsic protein 1;4
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-1338-1 - 5-prime edge 
    GTTCTTGGCT CGGAAGTTGT CTCTGACCAG AGCTGTGTTC TACATGATTA 
    TGCAATGTCT TGGAGCCATC TGTGGTGCCG GAGTCGTCAA AGGTTTCCAG 
    CCAACGCCGT ACCAGACTCT CGGTGGTGGT GCTAACACCG TTGCTCATGG 
    CTACACCAAA GGTTCTGGCC TTGGTGCTGA AATCATCGGA ACATTCGTTC 
    TCGTCTACAC TGTCTTCTCC GCCACCGACG CCAAGAGAAG CGCCCGTGAC 
    TCACACGTCC CGGTATGGAC CCCTCTCTTA GTTCCGGTTT GCTGATTTTA 
    TTGCTTTAAT TAGACTACTA ACCGATCGAT TTTCCCCGGT TTTATTGGTT 
    TAACAGTTTA TGACTAATAA TTGGTCACTC TCTATTGTAG ATTTTGGCGC 
    CGCTCCCAAT CGGATTTGCA GTGTTCTTGG TACACTTGGC AACAATTCCG 
    ATCACCGGGA CCGGAATCAA CCCAGCTAGA AGTCTTGGAG CCGCAATTAT 
    CTACAACAAG GACCACTCTT GGGATGACCA TGTGAGTAAA CAACTCTAAT 
    GAAAAGGACA ACTCAAAACG TATTATGATG TTTTCTAATA TATTTGAATT 
    TGTAAAATTG TGGTGGTTGT TGCAGTGGAT TTTCTGGGTT GGACCATTCA 
    TTGGGAGCAG CTNTAGCAGC ACTATATCAC CAGATTGT

AT4G00430.1

Model type
Protein coding
Short Description
plasma membrane intrinsic protein 1;4
Curator Summary
a member of the plasma membrane intrinsic protein subfamily PIP1.
Computational Description
plasma membrane intrinsic protein 1;4 (PIP1;4); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1B (TAIR:AT2G45960.1); Has 10702 Blast hits to 10683 proteins in 2216 species: Archae - 88; Bacteria - 5147; Metazoa - 1472; Fungi - 442; Plants - 2512; Viruses - 2; Other Eukaryotes - 1039 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00430.2

Model type
Protein coding
Short Description
plasma membrane intrinsic protein 1;4
Curator Summary
a member of the plasma membrane intrinsic protein subfamily PIP1.
Computational Description
TRANSMEMBRANE PROTEIN C (TMP-C); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1B (TAIR:AT2G45960.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR