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11-1386-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1279486 [Map]; Strand: w
      • AT1G04610.1 - [+] show detail - YUCCA 3
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 11-1386-1 - 3-prime edge 
    ATTATTTCCA TACATCTTCC ACAGAGTTTA GAGTTTGCTT GTCTGGTTGT 
    GAGGAGAAAA CAGAAGAAAT TTTAAGAATG TAGAAGAAGA AAAAAGAAAG 
    ATGTTGGAAA CTTTTTAAGA CAAGAGGATG GAGATGTAAG TGTATGTGTG 
    TGTTCTGTTG GATTGGAGAA GGAGATGTAT AAATAGAGAA GACGACTTGA 
    TGCAAATTGG TAATTGTAAA ATTAGTAAAA ATATTATTAT TATATATTTA 
    GCTTCTGAAT GTTATTTATA TCTCAAATGA TAAGCCT

AT1G04610.1

Model type
Protein coding
Short Description
YUCCA 3
Computational Description
YUCCA 3 (YUC3); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: auxin biosynthetic process; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: YUCCA 7 (TAIR:AT2G33230.1); Has 9657 Blast hits to 9637 proteins in 1196 species: Archae - 33; Bacteria - 4899; Metazoa - 784; Fungi - 1494; Plants - 670; Viruses - 0; Other Eukaryotes - 1777 (source: NCBI BLink).
Link
InterPro Scan - TAIR