1. Home
  2. Mutant Lines
  3. 11-1402-1

11-1402-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 303794 [Map]; Strand: w
      • AT5G01780.1 - [+] show detail - 2-oxoglutarate-dependent dioxygenase family protein
        Distance: 0; Region: intron1 (CDS)
      • AT5G01780.2 - [+] show detail - 2-oxoglutarate-dependent dioxygenase family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 11-1402-1 - 3-prime edge 
    CATATCAAGT ACTGTTGTTT AGAGATTATG AACTCTCCAT TGGCTCCCAG 
    TGATTTTCCT ATGATCAAAG CATAATCGTG GCGGTATCTA AAGGACACGT 
    TATGTTAATT CTGTTAAGCA GACTGCATCG CTTGACTCAC TTAATGATTA 
    TGAAGAGCAA TTTCCACCAC TTACTGGTGG CTCTAAGACG AAGAAGTTTT 
    ATCTTGGTTC TACCAATCCT TCTACTCCAT GTCAAAGTTC ACAGCTTCAA 
    AACTGGACAA GCGGTAAGGA TGCTTTGTCT TTGCAGAGGA ATTTGGGATG 
    TAAGAATAGG AGGAGGAGAC GGGCTTCACG GTTTTTACAT GAAGAATCCA 
    ATGGGACAAC TTTTGAGGTT GGCGCTGGTA TTGGCTCTCC AACAAGTATG 
    GTTCATTTTG ATTCTACCAA CCTTTCTTCT TCTAGTAAAA GTTCACAATC 
    TCAAAATTTG AAAATCCGCA AGGTTAGGAA TCACAGGAAT T

AT5G01780.1

Model type
Protein coding
Short Description
2-oxoglutarate-dependent dioxygenase family protein
Computational Description
2-oxoglutarate-dependent dioxygenase family protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate-dependent dioxygenase family protein (TAIR:AT3G14160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G01780.2

Model type
Protein coding
Short Description
2-oxoglutarate-dependent dioxygenase family protein
Computational Description
2-oxoglutarate-dependent dioxygenase family protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: 2-oxoglutarate-dependent dioxygenase family protein (TAIR:AT3G14160.1).
Link
InterPro Scan - TAIR