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11-1428-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11583100 [Map]; Strand: c
      • AT1G32172.1 - [+] show detail - other RNA
        Distance: 2553; Region: intergenic
      • AT1G32180.1 - [+] show detail - cellulose synthase-like D6
        Distance: 3416; Region: intergenic
    Flanking Genome Sequence: 11-1428-1 - 3-prime edge 
    GATCCAAGTC ACCTTAGGAC TGAGGAAATA TTTGGTTGTC TCATTGGCAA 
    AGGATTCTCC AACAACGAAA ACTCATCCCT GATATTGTTA ATATTGTACC 
    TTGCGAATCA AGATATATGA TATTTAATTA GTTCTTACAA GTTATAGATC 
    ACNTTGAACA CGTCAGACGT TTCCAGAAAA AGTGTGTTTA TCTACCTGAC 
    CCTTCTTCTT TCGGGGAGAC TGAATGGCTT TCTTAAATTA GGTTCTTTTC 
    CGCTTAAGAT CCGTCTACCT TGTTATAAAA CCATTCTATT AGCAGTATAC 
    TAAATACACA AGACCGTAAA AAACAAATAT GAAAAGAGAC AAAGATAGTT 
    CATCTACCTG ACACTTCCTT TTTCTTAGTC GACTGAATCA CTTTCTTGTT 
    AAATTATTTT CAGCCTAAGA GTCCACCATC TTGAAACAAA ACCATTCTAT 
    TAGTGGTATA CTTAATACAA GACTATACCT AAAATAAAAC CACAAAAATA 
    ATGCTAATGG AGAAGGAAAT CTTACGAAGT CTGATCCATT CCGGGATTTG 
    ACTGATTTGC TCTTGTTGTT TCTATTAATT TTGACAATGA AACAGTGTCC 
    AAAGCTGAAA TATCGAACAT GTTCATTAAG TATGACAAAA ACCAGCTTTT 
    ANTATTGGTT TTGTCCTTTT TCTCAAGTAT GTATTCATAA GAAAAATNTG 
    AAGCAAAAGT ATTTAA

AT1G32172.1

Model type
Other RNA
Short Description
other RNA
Link
InterPro Scan - TAIR

AT1G32180.1

Model type
Protein coding
Short Description
cellulose synthase-like D6
Curator Summary
encodes a gene similar to cellulose synthase
Computational Description
cellulose synthase-like D6 (CSLD6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: plant-type cell wall biogenesis, cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: leaf whorl, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose-synthase like D2 (TAIR:AT5G16910.1); Has 3332 Blast hits to 2680 proteins in 615 species: Archae - 13; Bacteria - 1453; Metazoa - 5; Fungi - 21; Plants - 1756; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink).
Link
InterPro Scan - TAIR