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11-1457-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 5440523 [Map]; Strand: c
      • AT5G16600.1 - [+] show detail - myb domain protein 43
        Distance: 278; Region: intergenic
      • AT5G16610.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 4399; Region: intergenic
    Flanking Genome Sequence: 11-1457-1 - 5-prime edge
    GACTAAGGTA GTATATAAGT AGCCAAGGAA AATAAAAAGT CTTTTTGGAT 
    AAGTCGTAAA ATGTTAAGGT TTAAGAATAT TCATTATATA ATCGATGATG
    ACTCAATGGA GTAACGTTTT GGAATGAAAT TTAATTAATA TCAATTGGTA
    TATTAGGTTA AACTTTAATG GTGTTTTATA TATATTTTTC CAAAGAAATA
    TTTCGTAAGT GAAGGAAAAA AAACAGAAAA AACGATCTGT CCACAACTGC
    AATCTTTATT ACATGTATTG TACACCATAA TCCACTAAAC TGCAACACCA
    AGCCAACCCC AAATCCCCCC ACTACTTCAA GAACAAAAAA AAAAAATTTT
    NTTTAAAAAA NCNNCAAAAA AAACCTAAAN CCTNNGGGAA ANAAANNGCC
    CNNAANTTTN NNTNAAAANC CTTTTTNNAN NNNCCTTTNC NTTTNCNAAA
    AAANCCNTNT TTTNNTTTTT TTNNAAANNT TNCNAANNNG NNAAAANNTT
    NGNNNCCCCN NAGNTNCTTN NTTNAACNAN NCNNGNGGTG AACCTGCCCG
    TTTTTTTTAN NTNCNCCCCC NAAAAANTNT TNGGGGNAAA CCCCCTTGGG
    GNAAAAAANC CCCTTTTNNN NAAAAAACTG GGAAAACTCN CCCCCGGNCC
    CCCNGNGGAT TTCCCCCCCC CNTNAAANGG AANGGNAAAN GGGAAANTTT
    TTTCNT

AT5G16600.1

Model type
Protein coding
Short Description
myb domain protein 43
Curator Summary
Encodes a putative transcription factor (MYB43).
Computational Description
myb domain protein 43 (MYB43); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 20 (TAIR:AT1G66230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G16610.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR