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11-1460-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23351326 [Map]; Strand: w
      • AT3G63200.1 - [+] show detail - PATATIN-like protein 9
        Distance: 3762; Region: intergenic
      • AT3G63210.1 - [+] show detail - Protein of unknown function (DUF581)
        Distance: 2289; Region: intergenic
    Flanking Genome Sequence: 11-1460-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATAAAAG TTTTATATAA TATCACGTTG AGATAATGCG TATAAGAAGA 
    AAAAGAATAT AGATGTGTAC AGAATCCAAT TATCCAAGTA CAAATGTTTT 
    AGAAATAACG TTTTGCAGCG TTGTTGTATA AGTACATAAC NGGATCATTT 
    TGGCNGGCGA TTGAGAGATT CAAAAACGTC AAAGATGAAA AGATTCTCGT 
    TTGTTTTTAT TTCTTTATTA AATAATAACA ATAGTGATTA TATGTTAGCT 
    TTATGATGTG CTTAGTTAAT CCCAAAATCG GCTATGATGA GATTTAAGAA 
    GCCCCAAATA AATAAAGTAT AATGTTTGTG GCCCTTCTTC AATTAATATA 
    AAGAAACAAA AAAATGAAGC CGATGAAAAA GAAGAAGTAT TCAACTGTTG 
    CAAGATATAA ATATTTGAAT TTATCCGTTA CAATATACGA GTATGGCAGA 
    TTGATTTATT TGTACAAGTG ATCCAAGCAT TTGATGTATA AGTAAGTAGT 
    AAATCAACGA ACAACAAATA CAGTNGAGAG AGTNTGAAAA AGAAATACGA 
    GTCAACCAGC CACCAACTAA TTTNAAATAT AAAGNCNAAT GTTTGATGGA 
    TNACCANCCC GGGNNGGGAN NANNCGGNCC NNT

AT3G63200.1

Model type
Protein coding
Short Description
PATATIN-like protein 9
Computational Description
PATATIN-like protein 9 (PLP9); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: metabolic process, lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: PATATIN-like protein 6 (TAIR:AT2G39220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G63210.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF581)
Curator Summary
encodes a novel zinc-finger protein with a proline-rich N-terminus, identical to senescence-associated protein SAG102
Computational Description
Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT3G22550.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR