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11-1533-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1237980 [Map]; Strand: c
      • AT1G04540.1 - [+] show detail - Calcium-dependent lipid-binding (CaLB domain) family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-1533-1 - 3-prime edge 
    GTTTCGGATC TTCTTAGCAG GGCTGAACGG AGTCGTTTAG CTAATAGACA 
    ACCAGCGAGT GCAATAGTGA GCAGTGAATC TGAAACTCTT CCCACCACGA 
    CAGATTCTGA TGAGAAAAAA TCGAGTGAGT ATACACCTCC TAGTAAAAAC 
    CTTAGAGTTC CAAGGCAACG ATACAATTCC ATTGAATCAG ATCTCATAAA 
    TCCGTCGCCA ATGGAGAAAC CCCATGTGGT AGTGTCGAGA AGGGAGAGAC 
    ACGATGTTAT GCCCCGTATA GTTCGTATCA ACAATCAGGT AAGACACCGA 
    GGAAGAAGAC AAGGATCGAG AAACAAAGAT CAGTGAAAGC T

AT1G04540.1

Model type
Protein coding
Short Description
Calcium-dependent lipid-binding (CaLB domain) family protein
Computational Description
Calcium-dependent lipid-binding (CaLB domain) family protein; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT2G33320.1); Has 556 Blast hits to 454 proteins in 75 species: Archae - 0; Bacteria - 32; Metazoa - 92; Fungi - 46; Plants - 336; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink).
Link
InterPro Scan - TAIR