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11-1550-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 95850 [Map]; Strand: w
      • AT4G00230.1 - [+] show detail - xylem serine peptidase 1
        Distance: 0; Region: exon7 (CDS)
    Flanking Genome Sequence: 11-1550-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCA TCATGCTGCT AAGAACACAG ACGATAAGTA 
    CTTGGCTAGG TAACATCATT ATCACCATCA ACTTCATTTG AATATGTTAA 
    GAGAAACTAA GACATTGTTT GTTTGATGAT GTTTAAGGTA TTGTTTCTCT 
    GATTCTTTGG ATCGAAAGAA GGTGAAGGGA AAGGTAATGG TGTGTAGAAT 
    GGGAGGAGGT GGTGTGGAGT CTACTATCAA AAGCTATGGA GGTGCTGGTG 
    CCATCATTGT AAGTGATCAA TATCTTGACA ATGCTCAGAT TTTCATGGCA 
    CCTGCCACCA GTGTTAATAG CTCCGTTGGC GATATTATCT ACCGATATAT 
    CAACTCCACA AGGTCCTCTT TGATATTCTT GGGTATGATA CTATACTACA 
    AGTGTGTTCA CAGCTAAGTA ACTCTTTGTT TATGCTTTTC TCAGATCAGC 
    ATCGGCTGTG ATTCAGAAAA CTCGGCAAGT GACTATCCCT GCTCCATTTG 
    TTGCTTCTTT TTCATCAAGA GGTCCAAATC CGGGATCAGT ACGCCTTCTC 
    AAGGTATATA TGACTTGATC AATGTCATCT GTTTATTGAT AGATGCGGAT 
    CTTATCTTAT GTTTCTGCCG TTTTTGCGGA TTGTAGCCTG ATATCGCTGC 
    ACCCGGGATT GATATATTGG CCGGCCTTCC TCTAAGAGAT CACTGACTGG 
    GTANATGGTG ACNCACAGNT CTC

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 95852 [Map]; Strand: w
      • AT4G00230.1 - [+] show detail - xylem serine peptidase 1
        Distance: 0; Region: exon7 (CDS)
    Flanking Genome Sequence: 11-1550-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCA 
    GCATCAACAC CACTTACAAG CGGATACGAT TTTGCTTTTG GACTAAACAT 
    GCTTATTCCC ATCCCCTTTC AATCATCAAA CTTTCTTATG TCAAACCCTA 
    ACTTGAATTT TAGCTAATTA AGAGATTGAT TTAGAGATGC TTACAGAGAA 
    GGATTTGCCG TTGCCGAGAT CTATCTTGCT CTTGAAAGTC CGATCGATTC 
    CGCTTGCAGC AACCGTCAAT ATCCACGGCT CGTGGTTCGT TACAGTCCCT 
    GAGCTCGGCC CGTCGTTACC GGCGGACGCC ACCGTGAGGA TC

AT4G00230.1

Model type
Protein coding
Short Description
xylem serine peptidase 1
Computational Description
xylem serine peptidase 1 (XSP1); FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilisin-like serine endopeptidase family protein (TAIR:AT5G03620.1); Has 8915 Blast hits to 7721 proteins in 1255 species: Archae - 263; Bacteria - 5173; Metazoa - 170; Fungi - 606; Plants - 1952; Viruses - 0; Other Eukaryotes - 751 (source: NCBI BLink).
Link
InterPro Scan - TAIR