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11-1567-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26602450 [Map]; Strand: w
      • AT1G70550.1 - [+] show detail - Protein of Unknown Function (DUF239)
        Distance: 2231; Region: intergenic
      • AT1G70560.1 - [+] show detail - tryptophan aminotransferase of Arabidopsis 1
        Distance: -2405; Region: intergenic
    Flanking Genome Sequence: 11-1567-1 - 3-prime edge 
    AATGAGGCAC TGACAAAACA TATTGAAAAG TTACCAATAA AGTTATGTAA 
    ATACACAATA TAGAATATGA TATTTCTGAT CATCTGAAGG AACTATAAAC 
    CTATTTGACA ATTTTAGAAA TTGCGTCTAA ACTCTTAAGT GATGCAAAAT 
    ATCTTTATCT CTATGACAGT AAAACTATAT TTAAAGGCTT TGTCAATGGA 
    CAATGGTTGA CAAAAAAGAG ATGTCAATGT TTTTCATTTC TTCTAAATTC 
    ATTTCATTAA TGGGAGTTAA CTGTTAACAT AAATAGTCAT ACTCATGATT 
    TTATCATTGC TTTATTGACG AGATTACTAT TTTAATAACA AAACCATTAT 
    TACATCGATA CCGCGAATAA AACAAATTTG GAAAAGTGTG CATATAACAC 
    TAAAATGCAT CTACTATTTG TTTCAAACAA TTACGAGTTT TAACTGTTTA 
    AGGAGTATGT CTTTTTGAAG GGTCGTGACT CGTGATATTC ACGTGGAAAG 
    GTTCGATATG ATTATTTAGC CTTACCTATA ATTGAATGAA GAGGAAAGCT 
    ACTAGTATTT AATTAGGTTG ACTTCAAAAT TGTCGA

AT1G70550.1

Model type
Protein coding
Short Description
Protein of Unknown Function (DUF239)
Computational Description
Protein of Unknown Function (DUF239); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT1G23340.2); Has 775 Blast hits to 727 proteins in 29 species: Archae - 0; Bacteria - 13; Metazoa - 0; Fungi - 10; Plants - 752; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G70560.1

Model type
Protein coding
Short Description
tryptophan aminotransferase of Arabidopsis 1
Curator Summary
TAA1 is involved in the shade-induced production of indole-3-pyruvate (IPA), a precursor to IAA, a biologically active auxin. It is also involved in regulating many aspects of plant growth and development from embryogenesis to flower formation and plays a role in ethylene-mediated signaling. This enzyme can catalyze the formation of IPA from L-tryptophan. Though L-Trp is expected to be the preferred substrate in vivo, TAA1 also acts as an aminotransferase using L-Phe, L-Tyr, L-Leu, L-Ala, L-Met, and L-Gln.
Computational Description
tryptophan aminotransferase of Arabidopsis 1 (TAA1); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Allinase, C-terminal (InterPro:IPR006948), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: tryptophan aminotransferase related 1 (TAIR:AT1G23320.1); Has 469 Blast hits to 469 proteins in 134 species: Archae - 44; Bacteria - 178; Metazoa - 0; Fungi - 0; Plants - 199; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).
Link
InterPro Scan - TAIR