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11-1582-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22778158 [Map]; Strand: c
      • AT3G61560.1 - [+] show detail - Reticulon family protein
        Distance: 0; Region: intron1 (CDS)
      • AT3G61560.2 - [+] show detail - Reticulon family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 11-1582-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATTCA 
    ATGCTTGATC TGCTATATGA TATGAGGATT GATTATGTTT GTTGATAATA
    AGTGTTTTGC TATGTTTTCA AACCATTTGG ATTTGTCTTA CTGTTGCCTT
    ATGTTTGCAG CGGCTGATGT GTTCTTGTGG AGGGACAAAA AACTCTCAGC
    TTCTGTTCTT GGTGTAGCGA CTGCCATATG GGTTCTGTTT GAATTGGTTG
    AGTATCATTT CTTGAGTCTT GTGTGTCACA TTTTGATATT CGCTCTCGCA
    GCCCTGTTTT TATTGTCCAA TGCTCATGCC TTTATGAACA AGTAAGCT

AT3G61560.1

Model type
Protein coding
Short Description
Reticulon family protein
Computational Description
Reticulon family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT2G46170.1); Has 1228 Blast hits to 1226 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 693; Fungi - 4; Plants - 505; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G61560.2

Model type
Protein coding
Short Description
Reticulon family protein
Computational Description
Reticulon family protein; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT2G46170.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR