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11-1593-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1215613 [Map]; Strand: c
      • AT1G04470.1 - [+] show detail - Protein of unknown function (DUF810)
        Distance: -951; Region: promoter
      • AT1G04480.1 - [+] show detail - Ribosomal protein L14p/L23e family protein
        Distance: -482; Region: promoter
    Flanking Genome Sequence: 11-1593-1 - 5-prime edge 
    TCTCGAAGTA TCTGAGAATC CTTTGTGGCA ACTCTAACTG TTAGACAATT 
    AAATCTATAA CCCGGTTATT AAACCGTATA TACCCAGTTA AAATGCAAAC 
    AGTTATTTAA AATATCCTCT ATTAGAGTCT TTGTGTTTTT TGCCTGTTGA 
    TGGATATATG AACGAGTTTG CTATCTAGAA TCGATAGAAT AAGCT

AT1G04470.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF810)
Computational Description
CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Mammalian uncoordinated homology 13, domain 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF810) (TAIR:AT2G33420.1); Has 201 Blast hits to 187 proteins in 29 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 4; Plants - 177; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G04480.1

Model type
Protein coding
Short Description
Ribosomal protein L14p/L23e family protein
Computational Description
Ribosomal protein L14p/L23e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L14b/L23e (InterPro:IPR000218), Ribosomal protein L14 conserved site (InterPro:IPR019972); BEST Arabidopsis thaliana protein match is: Ribosomal protein L14p/L23e family protein (TAIR:AT3G04400.1); Has 9301 Blast hits to 9300 proteins in 3178 species: Archae - 321; Bacteria - 5427; Metazoa - 383; Fungi - 266; Plants - 815; Viruses - 0; Other Eukaryotes - 2089 (source: NCBI BLink).
Link
InterPro Scan - TAIR