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11-1613-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 108652 [Map]; Strand: w
      • AT2G01180.1 - [+] show detail - phosphatidic acid phosphatase 1
        Distance: 0; Region: exon1 (5UTR)
      • AT2G01180.2 - [+] show detail - phosphatidic acid phosphatase 1
        Distance: -41; Region: promoter
    Flanking Genome Sequence: 11-1613-1 - 5-prime edge 
    GATGAGATGA GGTTAAAAAG AAATGTGGAT CTCGAAACTT AGGAGTAAAA 
    CAGAGGAATT GATCTAACGA AGACTATAGA TAAATAGTCC GATGAGGAGG 
    AGGTAGAAGA CGCGTTGTTA AACTTGCGAG TTTTGTTTTG TTTCCCAACT 
    TGACGGTTTG ATAGAAGAAT AANAAGAAAA CAGAGAGAGA CATGATTAGA 
    AACTCCTCTT CCTCTTGAAT TTTGACTTTT GACTTTTCAG TTATCGCCGG 
    TCTGATATGG CCTTCGTCTT TCTTCTCAGC CGCGTAGGTC CCACTTTTTA 
    GGAAGGTTCG GAAATCCAAG CCCGTAAGTA TATTTCTCTG TGGGCTTACC 
    TTACTTATTA GGCCTTATTA TGGGCCTTCC CTGCTCGTNT TGTCACATGA 
    TCCAGNTTTT CAAACTACAT AGGGGGNTTA TAATTTCTTT TTTTGGACTT 
    AACTATTTTA CTAATATGTA TNCATTNCAC ACATATCCNG AGCCCAGCCC 
    ATATCTTNAA GCCCNGCNAA TNAAATATNT AACTTTTTNN AATACAACAA 
    AATTTNNTGT AANAATGGGA AAGAATCCAA AAANTGGNAN CTTGTGGGGG 
    AAANAAAANT GGGANACNTC TTGTCTNNTG GGGNCCCNAT TGCNANGAAT 
    GAANTNCNGG TCANGTCCTN ANTNGAGGTC NAAAAAGNNN GCNNNNGTTT 
    NANGTGNGTT NGGCCTGTAT TTNATNTTAN

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 108588 [Map]; Strand: w
      • AT2G01180.1 - [+] show detail - phosphatidic acid phosphatase 1
        Distance: 0; Region: exon1 (5UTR)
      • AT2G01180.2 - [+] show detail - phosphatidic acid phosphatase 1
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 11-1613-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TGATCTCATC TCTTAGTCGA GATCTTCACT TTCTGATGAC AATAGGGTCG 
    TTTTTCTCTT CTCTCTTATT CTGGCGCAAT TCTCAGGTAA CCTCAATCGA 
    CTATTCTCTG TTCTACTCCT TTTTTCTTTA TCATTTTAAA AATCCTAACA 
    TTGAAAATAA AGTAGTTAAA TAGAGTCAAC GAAAACATTG TTAATGAAAC 
    AGTGGTGTGC TTAGCATAAC GAATCAGACA GACAAAAAGT GTCTGGATC

AT2G01180.1

Model type
Protein coding
Short Description
phosphatidic acid phosphatase 1
Curator Summary
Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves.
Computational Description
phosphatidic acid phosphatase 1 (PAP1); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process, response to stress; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.1); Has 2118 Blast hits to 2110 proteins in 392 species: Archae - 9; Bacteria - 357; Metazoa - 920; Fungi - 399; Plants - 198; Viruses - 3; Other Eukaryotes - 232 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01180.2

Model type
Protein coding
Short Description
phosphatidic acid phosphatase 1
Curator Summary
Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves.
Computational Description
phosphatidic acid phosphatase 1 (PAP1); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process, response to stress; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR