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11-1618-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1211286 [Map]; Strand: c
      • AT1G04457.1 - [+] show detail
        Distance: -737; Region: promoter
      • AT1G04470.1 - [+] show detail - Protein of unknown function (DUF810)
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: 11-1618-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    ATCGTCCAGT CGTTGGAGGC ATTGGAAGTT TTTGTCCTGT CCCAACCAAA 
    CCCATTCCGC TTGACTCGCA TGTCACGATG CTAAAGTCTT CCATAAGTTG 
    TTCTGTTGGT TGGCCCATAA GCTGAATCAC TCCTTCAACT GTCTCTGCCT 
    CTCTATCCAC CACTTCCTCT GGGATTAGTC CTTCGCCGCA AGTGCAATAA 
    ACCTTCTTCA AACTCTCGAA ATCTTCCTCG ATCAAATCGT GATCTGTTCG 
    ACAGAAAACT CGGGAATGTC CTCCCGCGAG AAGAACCGTC AAAACGACTT 
    CGAATGAAGC CTTCATGACT TCTTTCATCG CCAATGCTTG CGCTTTGTCC 
    GCAAGAATCG CGGTCATTAA CGTTAAGTTC TGTTTCAAGA TTCGCAACGC 
    GGGTTTGATC CTCCCGTTCG CGACATCTCC GGTGTATAGG CTTTCGTAGA 
    ATACAGAGTA TGAGTCTAGG AAGATTAACC GGTAAGCTGC AACCTCAGAG 
    ACATGTTGGC ATGCAGATTC GATTCCTGCT TGAGTGAATT

AT1G04457.1

Model type
Pseudogene
Curator Summary
Pseudogene of AT2G33450; 50S ribosomal protein L28, chloroplast (CL28)
Link
InterPro Scan - TAIR

AT1G04470.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF810)
Computational Description
CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Mammalian uncoordinated homology 13, domain 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF810) (TAIR:AT2G33420.1); Has 201 Blast hits to 187 proteins in 29 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 4; Plants - 177; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
Link
InterPro Scan - TAIR