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11-1622-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 16303544 [Map]; Strand: c
      • AT2G39050.1 - [+] show detail - hydroxyproline-rich glycoprotein family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-1622-1 - 3-prime edge 
    CTTTGGAGTA CCACCGCCAC ACGTCGATGC TCCGCCACAA CCTCATGGTC 
    TTTACCAGTC ACAGCCTCAT TTTGATCCTT ACGCGCCTAC TCCTCAAGCT 
    CCGGCGCCTT ACCGATCAGA AACTCAATTC GAACCCCACG CGCCTCCGCC 
    TTACCGATCA GAGCCTTACT TTGAAACTCC GGCACCACCG CCTTCATTTG 
    GTCATGTGAG TCATGTTGGT CACCAATCAC CCAACGAATC TTACCCACCG 
    GAACACCACC GTTACGGAGG TTATCAACAG CCGTCTAATT CTTTACTGGA 
    AAGTCATGGA GATCACAGTG GAGTCACGCA CGTGGCTCAC CATAGCTCAA 
    ATCAGCCCCA ATCGTCTTCT GGTGTCTACC ACAAGCCTGA TGAGAATCGT 
    CTACCTGATA ATCTTGCTGG ACTCGCCGGA AGAGCAACGG TGAAGGTGTA 
    TTCCAAGGCG GAGCCTAACT ATAATTTGAC GATCAGAGAT GGTAAGGTTA 
    TTCTCGCCCC AGCGGATC

AT2G39050.1

Model type
Protein coding
Short Description
hydroxyproline-rich glycoprotein family protein
Computational Description
hydroxyproline-rich glycoprotein family protein; CONTAINS InterPro DOMAIN/s: Ricin B-related lectin (InterPro:IPR008997), Ricin B lectin (InterPro:IPR000772); Has 1708 Blast hits to 1449 proteins in 222 species: Archae - 0; Bacteria - 47; Metazoa - 514; Fungi - 386; Plants - 615; Viruses - 5; Other Eukaryotes - 141 (source: NCBI BLink).
Link
InterPro Scan - TAIR